helical_bundle Directory Reference

Directory dependency graph for helical_bundle:

Directories
directory	parameters

Files
file	BundleGridSampler.cc
	This mover samples conformations of a helical bundle by performing a grid search in Crick parameter space.
file	BundleGridSampler.fwd.hh
	Defines owning pointers for BundleGridSampler mover class.
file	BundleGridSampler.hh
	Headers for BundleGridSampler.cc. Samples conformations of a helical bundle by performing a grid search in Crick parameter space.
file	BundleGridSamplerCreator.hh
	This class will create instances of Mover BundleGridSampler for the MoverFactory.
file	BundleGridSamplerHelper.cc
	A class that stores the various parameter perturbations that will be sampled by the BundleGridSampler mover.
file	BundleGridSamplerHelper.fwd.hh
	Owning pointers and whatnot for BundleGridSamplerHelper class.
file	BundleGridSamplerHelper.hh
	Prototypes and method declarations for the BundleGridSamplerHelper class.
file	FitSimpleHelix.cc
	Determines the Crick parameters describing a straight helix, given an input pose.
file	FitSimpleHelix.fwd.hh
	Defines owning pointers for FitSimpleHelix mover class.
file	FitSimpleHelix.hh
	Headers for FitSimpleHelix mover class.
file	FitSimpleHelixCreator.hh
	This class will create instances of Mover FitSimpleHelix for the MoverFactory.
file	FitSimpleHelixMultiFunc.cc
	Multifunction class implementation for fitting a simple (straight) helix to the Crick parameters.
file	FitSimpleHelixMultiFunc.hh
	Multifunction class implementation for fitting a simple (straight) helix to the Crick parameters.
file	MakeBundle.cc
	Builds a helical bundle using the Crick parameters.
file	MakeBundle.fwd.hh
	Defines owning pointers for MakeBundle mover class.
file	MakeBundle.hh
	Headers for MakeBundle.cc. Builds a helical bundle using the Crick parameters.
file	MakeBundleCreator.hh
	This class will create instances of Mover MakeBundle for the MoverFactory.
file	MakeBundleHelix.cc
	Builds a single helix as part of a helical bundle.
file	MakeBundleHelix.fwd.hh
	Defines owning pointers for MakeBundleHelix mover class.
file	MakeBundleHelix.hh
	Headers for MakeBundleHelix.cc. Builds a single helix as part of a helical bundle.
file	MakeBundleHelixCreator.hh
	This class will create instances of Mover MakeBundleHelix for the MoverFactory.
file	PerturbBundle.cc
	Perturbs a helical bundle by altering the Crick parameters.
file	PerturbBundle.fwd.hh
	Defines owning pointers for PerturbBundle mover class.
file	PerturbBundle.hh
	Headers for PerturbBundle.cc. Perturbs a helical bundle by altering the Crick parameters.
file	PerturbBundleCreator.hh
	This class will create instances of Mover PerturbBundle for the MoverFactory.
file	PerturbBundleHelix.cc
	Reads the Crick parameters for a piece of a pose from the input pose and sets the mainchain torsions accordingly. The parameters are presumed to have been perturbed by another mover. This mover is intended to be called by the PerturbBundle mover, which handles the perturbation of the Crick parameters.
file	PerturbBundleHelix.fwd.hh
	Defines owning pointers for PerturbBundleHelix mover class.
file	PerturbBundleHelix.hh
	Headers for PerturbBundleHelix.cc. Reads the Crick parameters for a piece of a pose from the input pose and sets the mainchain torsions accordingly. The parameters are presumed to have been perturbed by another mover. This mover is intended to be called by the PerturbBundle mover, which handles the perturbation of the Crick parameters.
file	PerturbBundleHelixCreator.hh
	This class will create instances of Mover PerturbBundleHelix for the MoverFactory.
file	PerturbBundleOptions.cc
	A class for options for the PerturbBundle mover.
file	PerturbBundleOptions.fwd.hh
	Owning pointers and whatnot for PerturbBundleOptions class.
file	PerturbBundleOptions.hh
	Prototypes and method declarations for the PerturbBundleOptions class.
file	util.cc
	Utility functions for helical bundle construction.
file	util.hh
	Headers for utility functions for helical bundle construction.