- k -

• k : protocols::cluster::Exemplar , protocols::md::Constraint , protocols::normalmode::ContactStruct
• k48r_48_lys_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_48k_mtsl_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_ctr_of_mass_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_docking_map_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_end_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_swap_ : protocols::ub_e2c::ubi_e2c_modeler
• k48r_trim_end_ : protocols::ub_e2c::ubi_e2c_modeler
• k_ : protocols::normalmode::NormalMode
• k_dampen_ : protocols::normalmode::NormalModeMultifunc
• k_long_ : protocols::normalmode::NormalMode
• k_short_ : protocols::normalmode::NormalMode
• k_SS_ : protocols::normalmode::NormalMode
• k_uniform_ : protocols::normalmode::NormalMode
• Kappa_ : protocols::md::MDBase
• kbp_data_ : protocols::qsar::scoring_grid::ShapeGrid
• KbT_ : protocols::make_rot_lib::MakeRotLibMover , protocols::make_rot_lib::MakeRotLibOptionsData
• keep_aas_ : protocols::toolbox::task_operations::RestrictIdentitiesAtAlignedPositionsOperation
• keep_adding_to_statistics_ : protocols::jd2::archive::NormalizedEvaluatedArchive
• keep_base_fixed_ : protocols::stepwise::modeler::rna::sugar::VirtualSugarJustInTimeInstantiator , protocols::stepwise::modeler::rna::sugar::VirtualSugarSampler
• keep_center : protocols::toolbox::ClusterOptions
• keep_covalent_ : protocols::enzdes::AddOrRemoveMatchCsts
• keep_current_ds_ : protocols::denovo_design::DisulfidizeMover
• keep_disulfide_cys_ : protocols::simple_moves::MakePolyXMover
• keep_gly_ : protocols::simple_moves::MakePolyXMover
• keep_history_ : protocols::moves::PyMolMover , protocols::ncbb::NcbbDockDesignProtocol , protocols::ncbb::oop::OopDockDesignProtocol
• keep_input_foldtree_ : protocols::forge::remodel::RemodelLoopMover
• keep_known_bb_torsions_at_junctions_ : protocols::forge::build::SegmentInsert , protocols::forge::build::SegmentRebuild
• keep_mover_state_ : protocols::rosetta_scripts::MultipleOutputWrapper
• keep_native_ : protocols::protein_interface_design::filters::FilterScanFilter , protocols::toolbox::task_operations::SeqprofConsensusOperation
• keep_pose_constraint_ : protocols::hybridization::HybridizeProtocol
• keep_pose_in_memory_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• keep_pose_in_memory_hydrid_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• keep_pro_ : protocols::simple_moves::MakePolyXMover
• keep_rnl_pose_ : protocols::enzdes::EnzdesScorefileFilter
• keep_sidechains_ : protocols::cryst::RecomputeDensityMapMover
• keep_task_allowed_aa_ : protocols::antibody::design::ResidueProbDesignOperation
• keep_trying_ : protocols::matdes::MatDesGreedyOptMutationMover
• key : protocols::loophash::LeapIndex
• key_ : protocols::frag_picker::VallResidue , protocols::multistate_design::MetricCalculatorFitnessFunction , protocols::toolbox::pose_metric_calculators::MetricValueGetter
• kic_ : protocols::seeded_abinitio::CloseFold
• kic_modeler_ : protocols::stepwise::modeler::StepWiseConnectionSampler
• kic_modeler_if_relevant_ : protocols::stepwise::modeler::options::StepWiseRNA_ModelerOptions
• kic_mover_ : protocols::loop_modeling::LoopBuilder
• kic_res1_ : protocols::cyclic_peptide::DeclareBond
• kic_res2_ : protocols::cyclic_peptide::DeclareBond
• kicclose_ : protocols::mpi_refinement::WorkUnit_KicCloser
• kinemage_file_name_ : protocols::match::output::WriteUpstreamCoordinateKinemage , protocols::match::output::WriteUpstreamHitKinemage
• kinematic_control_ : protocols::abinitio::Protocol
• kinematic_mover_ : protocols::enzdes::EnzdesFlexBBProtocol , protocols::protein_interface_design::movers::PlaceOnLoop
• kinetic_energy_ : protocols::md::MDBase
• kinked_ : protocols::antibody_legacy::Antibody
• kinmover_ : protocols::loops::loop_closure::kinematic_closure::KinematicPerturber , protocols::loops::loop_closure::kinematic_closure::KinematicWrapper
• kT_ : protocols::mpi_refinement::StructAvrgMover , protocols::optimize_weights::PNatLigPoseOptEData , protocols::stepwise::monte_carlo::mover::AddMover , protocols::stepwise::monte_carlo::rna::RNA_AddDeleteMonteCarlo , protocols::surface_docking::CentroidRelaxMover , protocols::surface_docking::FullatomRelaxMover