- q -

• q1 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q2 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q3 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q4 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q5 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q6 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q_pos_ : protocols::frag_picker::quota::QuotaSelector
• Qs : protocols::simple_filters::SymmetricMotifFilter
• qsar_map_ : protocols::qsar::qsarMap , protocols::qsar::qsarMover , protocols::qsar::scoring_grid::GridManager
• quench_temp_ : protocols::moves::MonteCarlo
• query_ : protocols::frag_picker::scores::DisulfideIdentity , protocols::frag_picker::scores::HydrophobicityProfileSimilarity , protocols::frag_picker::scores::HydrophobicitySimilarity , protocols::frag_picker::scores::Phi , protocols::frag_picker::scores::ProlinePhiScore , protocols::frag_picker::scores::Psi , protocols::frag_picker::scores::RamaScore , protocols::frag_picker::scores::SecondaryIdentity , protocols::frag_picker::scores::SequenceIdentity , protocols::frag_picker::scores::SolventAccessibility
• query_bin_probs_ : protocols::frag_picker::scores::LAMBEGO_Similarity , protocols::frag_picker::scores::TorsionBinSimilarity
• query_class_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_cnt_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_d_phi_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_d_psi_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_dist_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_end_ : protocols::antibody_legacy::GraftOneMover
• query_index_ : protocols::comparative_modeling::ExtraThreadingMover , protocols::comparative_modeling::ThreadingMover
• query_len_ : protocols::frag_picker::scores::ABEGO_SS_Score , protocols::frag_picker::scores::LAMBEGO_Similarity , protocols::frag_picker::scores::PartialSecondarySimilarity , protocols::frag_picker::scores::Psi , protocols::frag_picker::scores::SecondarySimilarity , protocols::frag_picker::scores::TalosSSSimilarity , protocols::frag_picker::scores::TorsionBinSimilarity
• query_name_ : protocols::toolbox::task_operations::AlignedThreadOperation
• query_names_ : protocols::protein_interface_design::filters::RmsdFilter
• query_phi_ : protocols::frag_picker::scores::PhiPsiRmsd , protocols::frag_picker::scores::PhiPsiSquareWell
• query_phi_prediction_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Phi
• query_phi_prediction_conf_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Phi
• query_position_i_ : protocols::frag_picker::nonlocal::NonlocalPair
• query_position_j_ : protocols::frag_picker::nonlocal::NonlocalPair
• query_positions_ : protocols::frag_picker::FragmentPicker
• query_profile_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::HydrophobicityProfileSimilarity , protocols::frag_picker::scores::ProfileScore , protocols::frag_picker::scores::ProfileScoreBlosum62 , protocols::frag_picker::scores::ProfileScoreDistWeight , protocols::frag_picker::scores::ProfileScoreL1 , protocols::frag_picker::scores::ProfileScoreStructL1
• query_psi_ : protocols::frag_picker::scores::PhiPsiRmsd , protocols::frag_picker::scores::PhiPsiSquareWell
• query_psi_prediction_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Psi
• query_psi_prediction_conf_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Psi
• query_region_ : protocols::simple_filters::DomainInterfaceFilter
• query_region_str_ : protocols::simple_filters::DomainInterfaceFilter
• query_residue_depth_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::FragmentCrmsdResDepth
• query_s2_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_sa_prediction_ : protocols::frag_picker::FragmentPicker
• query_seq_as_string_ : protocols::frag_picker::FragmentPicker
• query_sequence_ : protocols::frag_picker::scores::FragmentAllAtomCrmsd , protocols::frag_picker::scores::ProfileScoreDistWeight
• query_size_ : protocols::frag_picker::scores::AtomBasedConstraintsScore
• query_ss_ : protocols::frag_picker::scores::ProfileScoreDistWeight , protocols::frag_picker::scores::RamaScore , protocols::frag_picker::scores::SecondarySimilarity , protocols::frag_picker::scores::TalosSSSimilarity
• query_ss_as_string_ : protocols::frag_picker::FragmentPicker
• query_ss_profile_ : protocols::frag_picker::FragmentPicker
• query_start_ : protocols::antibody_legacy::GraftOneMover
• queryResidueIndex_ : protocols::frag_picker::FragmentCandidate
• querytag_ : protocols::jd2::CompareTags
• queue_head_ : protocols::match::output::UpstreamHitCacher
• quick_ : protocols::simple_filters::ShapeComplementarityFilter
• quick_alignment_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_pose_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_pose_is_intialized_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_tag_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_and_dirty_ : protocols::motifs::LigandMotifSearch , protocols::motifs::MotifSearch
• quota_fraction_ : protocols::frag_picker::quota::QuotaPool