Here is a list of all class members with links to the classes they belong to:

- j -

• j : core::scoring::fiber_diffraction::Hankel
• Jcomputed() : core::scoring::RDC
• Jdipolar() : core::scoring::RDC , core::scoring::RDC_Rohl
• Jdipolar_ : core::scoring::RDC , core::scoring::RDC_Rohl
• Jdipolar_computed_ : core::scoring::RDC
• JJH_Minimizer() : core::optimization::JJH_Minimizer
• jname2components_ : core::conformation::symmetry::SymmData , core::conformation::symmetry::SymmetryInfo
• jname2subunits_ : core::conformation::symmetry::SymmData , core::conformation::symmetry::SymmetryInfo
• jnum : core::kinematics::Node
• jnum2dofname_ : core::conformation::symmetry::SymmetryInfo
• job_data_ : core::chemical::sdf::MolWriter
• JOBDIST_OUTPUT_TAG : core::pose::datacache::CacheableDataType
• jump() : core::conformation::Conformation
• Jump : core::conformation::Conformation
• jump() : core::conformation::Conformation , core::io::silent::BinarySilentStruct , core::io::silent::ProteinSilentStruct_Template< T > , core::io::silent::RigidBodySilentStruct , core::io::silent::RNA_SilentStruct , core::io::silent::ScoreJumpFileSilentStruct , core::kinematics::AtomTree
• Jump() : core::kinematics::Jump
• jump() : core::kinematics::tree::Atom , core::kinematics::tree::BondedAtom , core::kinematics::tree::JumpAtom , core::pose::Pose
• jump_ : core::kinematics::tree::JumpAtom , core::pack::annealer::SimAnnealerBase , core::pack::task::residue_selector::JumpDownstreamSelector , core::pack::task::residue_selector::JumpUpstreamSelector
• jump_atom_id() : core::conformation::Conformation
• jump_clone_wts_ : core::conformation::symmetry::SymmetryInfo
• jump_clones() : core::conformation::symmetry::SymmetryInfo
• jump_clones_ : core::conformation::symmetry::SymmData , core::conformation::symmetry::SymmetryInfo
• jump_dir_ : core::conformation::symmetry::SymDof
• jump_direction() : core::conformation::symmetry::SymDof
• jump_edge() : core::kinematics::FoldTree
• jump_edge_ : core::kinematics::FoldTree
• jump_edge_count : core::kinematics::FoldTree
• jump_exists() : core::kinematics::FoldTree
• jump_follows() : core::conformation::symmetry::SymmetryInfo
• jump_follows_ : core::conformation::symmetry::SymmetryInfo
• jump_id_begin() : core::kinematics::MoveMap
• jump_id_end() : core::kinematics::MoveMap
• jump_id_map_ : core::kinematics::MoveMap
• jump_is_independent() : core::conformation::symmetry::SymmetryInfo
• jump_label_to_number_ : core::environment::SequenceAnnotation
• jump_neighbors_ : core::environment::FoldTreeSketch::Node
• jump_nr() : core::kinematics::FoldTree
• jump_pairs() : core::pose::full_model_info::FullModelInfo
• jump_point() : core::kinematics::FoldTree
• jump_point_ : core::kinematics::FoldTree
• jump_res_ : core::kinematics::ShortestPathInFoldTree
• jump_res_map() : core::pose::full_model_info::FullModelInfo
• jump_string_to_jump_num_ : core::conformation::symmetry::SymmData
• jump_string_to_virtual_pair_ : core::conformation::symmetry::SymmData
• JumpDownstreamSelector() : core::pack::task::residue_selector::JumpDownstreamSelector
• jumpfrom : core::kinematics::Node
• JumpID() : core::id::JumpID
• JumpID_Map : core::kinematics::MoveMap
• JumpingFrame() : core::fragment::JumpingFrame
• JumpLabelMap : core::environment::SequenceAnnotation
• jumpmark : core::kinematics::Node
• jumps_ : core::io::silent::BinarySilentStruct , core::io::silent::ProteinSilentStruct_Template< T > , core::io::silent::RigidBodySilentStruct , core::io::silent::RNA_SilentStruct , core::io::silent::ScoreJumpFileSilentStruct
• jumpto : core::kinematics::Node
• JumpUpstreamSelector() : core::pack::task::residue_selector::JumpUpstreamSelector