  | 
  
    Rosetta Core
    2015.20
    
   | 
 
 
 
  
  
  
  
 
 
- w -
- w1_
: core::scoring::func::SoedingFunc
 
- w2_
: core::scoring::func::SoedingFunc
 
- water_adduct_hbond_potential_
: core::scoring::ScoringManager
 
- water_builder_map_
: core::scoring::methods::LKB_ResidueInfo
 
- waters_
: core::scoring::methods::LKB_ResidueInfo
 
- wbb_bb_
: core::scoring::elec::FA_ElecEnergy
, core::scoring::elec::weight_triple
 
- wbb_sc_
: core::scoring::elec::FA_ElecEnergy
, core::scoring::elec::weight_triple
 
- wc_edge_paired_
: core::scoring::rna::data::RNA_DMS_LowResolutionPotential
 
- weight
: core::scoring::sc::MolecularSurfaceCalculator
 
- weight_
: core::io::silent::SilentEnergy
, core::scoring::AtomNeighbor
, core::scoring::constraints::SequenceProfileConstraint
, core::scoring::CSA
, core::scoring::DC
, core::scoring::electron_density::OneGaussianScattering
, core::scoring::fiber_diffraction::OneGaussianScattering
, core::scoring::func::CircularPowerFunc
, core::scoring::func::CircularSplineFunc
, core::scoring::func::CountViolFunc
, core::scoring::func::ScalarWeightedFunc
, core::scoring::func::SkipViolFunc
, core::scoring::func::SplineFunc
, core::scoring::func::TopOutFunc
, core::scoring::hbonds::HBond
, core::scoring::MinimizationEdge
, core::scoring::MinimizationNode
, core::scoring::RDC
, core::scoring::RDC_Rohl
, core::scoring::rna::data::RNA_Datum
, core::scoring::SmallAtNb
 
- weight_func_
: core::scoring::AtomNeighbor
 
- weight_type2name_
: core::scoring::hbonds::HBondTypeManager
 
- weight_type_lookup_
: core::scoring::hbonds::HBondDatabase
 
- weighted_total_
: core::pose::metrics::simple_calculators::InterfaceDeltaEnergeticsCalculator
 
- weights_
: core::pose::metrics::simple_calculators::InterfaceDeltaEnergeticsCalculator
, core::scoring::disulfides::Cb_Distance_Func
, core::scoring::func::SOGFunc_Impl
, core::scoring::func::USOGFunc
, core::scoring::hbonds::HBondEnergy
, core::scoring::methods::ReferenceEnergyNoncanonical
, core::scoring::packstat::PackingScore
, core::scoring::rna::RNA_SuitePotential
, core::scoring::ScoreFunction
 
- well_depth_
: core::scoring::func::FadeFunc
, core::scoring::func::LinearPenaltyFunction
, core::scoring::func::SquareWell2Func
, core::scoring::func::SquareWellFunc
 
- well_depth_burial_
: core::scoring::rna::data::RNA_DataBackboneEnergy
 
- well_depth_exposed_
: core::scoring::rna::data::RNA_DataBackboneEnergy
 
- well_offset_
: core::scoring::func::FadeFunc
 
- which_chi_
: core::pack::task::EX
 
- which_component_
: core::scoring::func::MinMultiHarmonicFunc
 
- which_netstate_worst_top_
: core::pack::annealer::MultiCoolAnnealer
 
- which_side
: core::pose::rna::BaseStack
 
- whole_line
: core::scoring::packstat::SimplePDB_Atom
 
- whole_pose_context_enmeths_
: core::scoring::MinimizationGraph
 
- wide_move_tolerance_sqr_
: core::scoring::NeighborList
 
- wide_nblist_
: core::scoring::NeighborList
 
- wide_nblist_extension_
: core::scoring::NeighborList
 
- wide_reference_coords_
: core::scoring::NeighborList
 
- width
: core::chemical::rna::GaussianParameter
 
- width_
: core::io::silent::SilentEnergy
 
- wildcard_mm_bondangle_library_
: core::scoring::mm::MMBondAngleLibrary
 
- wildcard_mm_torsion_library_
: core::scoring::mm::MMTorsionLibrary
 
- WINDOW_
: core::scoring::electron_density::ElectronDensity
 
- within1bonds_sets_for_atom_
: core::chemical::ResidueType
 
- within2bonds_sets_for_atom_
: core::chemical::ResidueType
 
- working_pose_
: core::scoring::rna::data::RNA_DMS_Potential
 
- working_pose_with_probe_
: core::scoring::rna::data::RNA_DMS_Potential
 
- worst_top_energy_
: core::pack::annealer::MultiCoolAnnealer
 
- Wradius
: core::scoring::etable::Etable
, core::scoring::etable::EtableOptions
, core::scoring::etable::MembEtable
 
- write_apolar_hydrogens_
: core::conformation::ResidueKinWriter
 
- write_atompot
: core::scoring::APBSConfig::I_PARAM
 
- write_backbone_hydrogens_
: core::conformation::ResidueKinWriter
 
- write_charge
: core::scoring::APBSConfig::I_PARAM
 
- write_diel
: core::scoring::APBSConfig::I_PARAM
 
- write_fold_tree_
: core::io::silent::RigidBodySilentStruct
 
- write_kappa
: core::scoring::APBSConfig::I_PARAM
 
- write_pdb_link_records_
: core::io::pdb::FileDataOptions
 
- write_pdb_parametric_info_
: core::io::pdb::FileDataOptions
 
- write_polar_hydrogens_
: core::conformation::ResidueKinWriter
 
- write_pot
: core::scoring::APBSConfig::I_PARAM
 
- write_smol
: core::scoring::APBSConfig::I_PARAM
 
- write_virtual_atoms_
: core::conformation::ConformationKinWriter
, core::conformation::ResidueKinWriter
 
- ws_methods_
: core::scoring::ScoreFunction
 
- wsc_sc_
: core::scoring::elec::FA_ElecEnergy
, core::scoring::elec::weight_triple
 
- wt
: core::scoring::dna::DirectReadoutPotential
 
- wt_aa_
: core::io::PositionDdGInfo::PositionDdGInfo
 
- wt_ang_
: core::scoring::disulfides::FullatomDisulfidePotential
 
- wt_dihCS_
: core::scoring::disulfides::FullatomDisulfidePotential
 
- wt_dihSS_
: core::scoring::disulfides::FullatomDisulfidePotential
 
- wt_len_
: core::scoring::disulfides::FullatomDisulfidePotential