utility Directory Reference

Directory dependency graph for utility:

Directories
directory	boinc
directory	excn
directory	factory
directory	file
directory	graph
directory	io
directory	json_spirit
directory	keys
directory	libsvm
directory	lua
directory	options
directory	pointer
directory	py
directory	signals
directory	sql_database
directory	tag
directory	thread
directory	tools

Files
file	assert.hh
file	backtrace.hh
	Programmatic backtrace whenever you want it.
file	basic_sys_util.cc
	All system functions in utility that have no other home.
file	basic_sys_util.hh
	All system functions in utility that have no other home.
file	Binary_Util.cc
file	Binary_Util.hh
file	BitSet.fwd.hh
	utility::BitSet forward declarations
file	BitSet.hh
	Simple bit set.
file	BitVector.fwd.hh
	utility::BitVector forward declarations
file	BitVector.hh
	Simple bit vector.
file	Bound.fwd.hh
	utility::Bound forward declarations
file	Bound.hh
	Bound value class.
file	CSI_Sequence.cc
	Terminal ASCII codes.
file	CSI_Sequence.fwd.hh
	Terminal ASCII codes.
file	CSI_Sequence.hh
	Terminal ASCII codes.
file	curl.cc
	Implements a OO interface to CURL wrapping and hiding the ugly C callbacks.
file	curl.hh
	Implements a OO interface to CURL wrapping and hiding the ugly C callbacks.
file	DereferenceIterator.hh
	class for Iterating across a container of OPs if the function expects iterators of the dereferenced objects. example: if you have a loop that iterates on decoys via SilentFileData::begin()... SilentFileData::end() it uses the dereferenced objects: i.e., it->fill_pose() SilentFileData sfd; my_func( sfd.begin(), sfd.end() );
file	down_cast.hh
	Fast polymorphic down-casting functions.
file	exit.cc
	Program exit functions and macros.
file	exit.hh
	Program exit functions and macros.
file	Factory.hh
	A singleton templated factory, is is usually created by protocols/init/init.cc object generated by factory must have name() and create() Factory< Outputter > and Factory< Inputter > are two examples of this factory in use Wonder if there is a way to do lazy initialization of this singleton.
file	fix_boinc_read.hh
file	fixedsizearray1.fwd.hh
file	fixedsizearray1.hh
file	FixedSizeLexicographicalIterator.fwd.hh
file	FixedSizeLexicographicalIterator.hh
	Class for iterating across all words of a compile-time-known fixed-length, composed of letters from varying alphabets, where each alphabet is represented by its size. This iteration is performed in lexicographical order. All allocation of a FixedSizeLexicographicalIterator takes place on the stack, and is therefore much faster than a regular LexigographicalIterator.
file	FixedSizeLexicographicalIterator.tmpl.hh
file	heap.cc
	class definition for a heap object based on Charlie Strauss's heap code ported over from rosetta++.
file	heap.fwd.hh
	forward class definition of class heap
file	heap.hh
	class definition for a heap object based on Charlie Strauss's heap code ported over from rosetta++. Stores a sorted list of integers based on floating-point values.
file	in_place_list.fwd.hh
file	in_place_list.hh
	a doubly linked list where elements are shuffled in place.
file	inline_file_provider.cc
file	inline_file_provider.hh
file	integer_mapping.cc
	A set of useful classes to map between two enumerations. So far, only a subset mapping is implemented.
file	integer_mapping.fwd.hh
file	integer_mapping.hh
	A set of useful classes to map between two enumerations. So far, only a subset mapping is implemented.
file	iter_util.hh
file	LexicographicalIterator.cc
file	LexicographicalIterator.fwd.hh
file	LexicographicalIterator.hh
	Class for iterating across all words of a fixed-length, composed of letters from varying alphabets, where each alphabet is represented by its size. This iteration is performed in lexicographical order.
file	make_static_database.py
file	minmax.hh
file	mpi_util.cc
file	mpi_util.hh
file	numbers.hh
	Brief utility classes for numeric usage.
file	OrderedTuple.fwd.hh
	Forward declaration of OrderedTuple class.
file	OrderedTuple.hh
	Class for compairing/sorting data where sort-precidence is in descending order from begin() to end()
file	recent_history_queue.cc
	A queue for holding the history in which certain members of a set are promoted to the front of the queue before eventually falling off the end of the queue.
file	recent_history_queue.hh
	A queue for holding the history in which certain members of a set are promoted to the front of the queue before eventually falling off the end of the queue.
file	Show.hh
	uniformed printing functionality for data types.
file	SimulateMPI.cc
file	SimulateMPI.fwd.hh
file	SimulateMPI.hh
file	SingletonBase.hh
	A base class for all singltons using CRTP and managing the complexity of safely initializing singltons in a thread-safe way.
file	sort_predicates.hh
file	static_database.cc
file	static_database.hh
file	stream_util.hh
file	string_util.cc
	Some std::string helper functions.
file	string_util.hh
	Some std::string helper functions.
file	utility.functions.hh
	Numeric functions (to avoid dependency on numeric package)
file	vector0.fwd.hh
	utility::vector0 forward declarations
file	vector0.hh
	vector0: std::vector with assert-checked bounds
file	vector0_bool.hh
	vector0: std::vector with assert-checked bounds: bool specialization
file	vector1.functions.hh
	some useful functions for vector1 that I'm tired of rewriting
file	vector1.fwd.hh
	utility::vector1 forward declarations
file	vector1.hh
	vector1: std::vector with 1-based indexing
file	vector1_bool.hh
	vector1: std::vector with 1-based indexing: bool specialization
file	vectorL.fwd.hh
	utility::vectorL forward declarations
file	vectorL.hh
	vectorL: std::vector with L-based indexing
file	vectorL_bool.hh
	vectorL: std::vector with L-based indexing: bool specialization
file	vectorL_Selector.hh
	vectorL lower index selectors