ContactMap Namespace Reference

Functions
def	ContactMap

Variables
list	Con = argv[1]
list	native = argv[2]
int	num_pdb = 0

Function Documentation

def ContactMap.ContactMap	(		Con,
			native,
			num_pdb
	)

Definition at line 11 of file ContactMap.py.

References PDBInfo.AminoAcidTable(), ObjexxFCL.len(), IO.load(), basic::database.open(), and PDBInfo.ResidueList().

Variable Documentation

list ContactMap.Con = argv[1]

Definition at line 107 of file ContactMap.py.

list ContactMap.native = argv[2]

Definition at line 108 of file ContactMap.py.

Referenced by align_pdbs(), ExposedStrandMover.apply(), HDdesignMover.apply(), supercharge.apply(), calc_rms_test(), calculate_pairwise_RMSD(), CaToAllAtom.CaToAllAtom(), basic::resource_manager::fallback_configuration::NativeFallbackConfiguration.fallback_specified(), basic::resource_manager::fallback_configuration::NativeFallbackConfiguration.get_native_filename_from_options(), initialize_native_pose(), main(), minimize_test(), pdb_minimizer(), pep_phipsi_analysis(), pep_rmsd_analysis(), register_options(), repack_test(), rna_denovo_test(), rna_fullatom_minimize_test(), rna_score_test(), run(), DockFragmentsMover.run(), and swa_rna_sample().

int ContactMap.num_pdb = 0

Definition at line 109 of file ContactMap.py.