hbs_design.cc File Reference

#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/ncbb/util.hh>
#include <core/import_pose/import_pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/operation/TaskOperation.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/ScoringManager.hh>
#include <core/chemical/VariantType.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <utility/pointer/owning_ptr.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/util.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/TrialMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/moves/PyMOLMover.hh>
#include <protocols/moves/RepeatMover.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/minimization_packing/RotamerTrialsMover.hh>
#include <protocols/minimization_packing/TaskAwareMinMover.hh>
#include <protocols/simple_moves/BackboneMover.fwd.hh>
#include <protocols/simple_moves/BackboneMover.hh>
#include <protocols/ncbb/hbs/HbsPatcher.hh>
#include <protocols/rigid/RigidBodyMover.hh>
#include <protocols/rigid/RB_geometry.hh>
#include <protocols/ncbb/util.hh>
#include <basic/MetricValue.hh>
#include <core/pose/metrics/CalculatorFactory.hh>
#include <core/pose/metrics/simple_calculators/SasaCalculatorLegacy.hh>
#include <protocols/simple_pose_metric_calculators/NumberHBondsCalculator.hh>
#include <protocols/simple_pose_metric_calculators/BuriedUnsatisfiedPolarsCalculator.hh>
#include <protocols/pose_metric_calculators/PackstatCalculator.hh>
#include <devel/init.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <string>
#include <sstream>

Classes
class	HbsDesignMover

Namespaces
	hbs_design

Typedefs
using	HbsDesignMoverOP = utility::pointer::shared_ptr< HbsDesignMover >
using	HbsDesignMoverCOP = utility::pointer::shared_ptr< const HbsDesignMover >

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("HbsDesign")
IntegerOptionKey const	hbs_design::pert_num ("hbs_design::pert_num")
IntegerOptionKey const	hbs_design::design_loop_num ("hbs_design::design_loop_num")
IntegerVectorOptionKey const	hbs_design::hbs_design_positions ("hbs_design::hbs_design_positions")

Typedef Documentation

using HbsDesignMoverCOP = utility::pointer::shared_ptr<const HbsDesignMover>

using HbsDesignMoverOP = utility::pointer::shared_ptr<HbsDesignMover>

Function Documentation

int main	(	int	argc,
		char *	argv[]
	)

References utility::io::oc::cout, hbs_design::design_loop_num, test.T009_Exceptions::e, hbs_design::hbs_design_positions, devel::init(), utility::excn::Exception::msg(), option, and hbs_design::pert_num.

Variable Documentation

basic::Tracer TR("HbsDesign")

static

Referenced by HbsDesignMover::apply().