operation Directory Reference

Directory dependency graph for operation:

Files
file	ClashBasedRepackShell.cc
	ClashBasedRepackShell header file.
file	ClashBasedRepackShell.fwd.hh
	forward declaration for ClashBasedRepackShell
file	ClashBasedRepackShell.hh
	ClashBasedRepackShell header file.
file	ClashBasedRepackShellCreator.hh
file	DesignRestrictions.cc
	Combine a set of ResidueSelectors and ResidueLevelTaskOperations concisely, using boolean logic to join selectors concisely.
file	DesignRestrictions.fwd.hh
	Combine a set of ResidueSelectors and ResidueLevelTaskOperations concisely, using boolean logic to join selectors concisely.
file	DesignRestrictions.hh
file	DesignRestrictionsCreator.hh
file	EnableMultiCoolAnnealer.cc
	Task Operation for turning on the multi-cool annealer.
file	EnableMultiCoolAnnealer.fwd.hh
	Task Operation for turning on the multi-cool annealer.
file	EnableMultiCoolAnnealer.hh
file	EnableMultiCoolAnnealerCreator.hh
file	EnableSmartAnnealer.cc
file	EnableSmartAnnealer.fwd.hh
file	EnableSmartAnnealer.hh
	The smart annealer uses tensorflow to decrease the sample space of a typical packing run.
file	EnableSmartAnnealerCreator.hh
file	FillAUTOTaskOperation.cc
	fills the AUTO behavior for all residues in Task. Useful if a protocol expects AUTO-style resfile, but no resfile present.
file	FillAUTOTaskOperation.fwd.hh
	fills the AUTO behavior for all residues in Task. Useful if a protocol expects AUTO-style resfile, but no resfile present.
file	FillAUTOTaskOperation.hh
file	FillAUTOTaskOperationCreator.hh
file	KeepSequenceSymmetry.cc
	Use this when you give Rosetta a multimer to design and you want the sequences of the chains to be the same but you don't need strict physical symmetry.
file	KeepSequenceSymmetry.fwd.hh
file	KeepSequenceSymmetry.hh
	Use this when you give Rosetta a multimer to design and you want the sequences of the chains to be the same but you don't need strict physical symmetry.
file	KeepSequenceSymmetryCreator.hh
file	NoRepackDisulfides.cc
	prevent disulfides from being repacked; assumes disulfide info in Pose is up-to-date
file	NoRepackDisulfides.fwd.hh
	forward declaration for NoRepackDisulfides
file	NoRepackDisulfides.hh
	prevent disulfides from being repacked; assumes disulfide info in Pose is up-to-date
file	NoRepackDisulfidesCreator.hh
file	OperateOnCertainResidues.cc
	class to support the general case of configuring PackerTask at the ResidueLevelTask level in some way, with an optional filter to limit the effects to certain residues
file	OperateOnCertainResidues.fwd.hh
	Forward declaration of a class that performs an operation on a packer task, in a configurable residue-specific manner.
file	OperateOnCertainResidues.hh
	class to support the general case of configuring PackerTask at the ResidueLevelTask level in some way, with an optional filter to limit the effects to certain residues
file	OperateOnCertainResiduesCreator.hh
file	OperateOnResidueSubset.cc
	Class, much like the OperateOnResidueSubset task operation, to apply a particular residue-level task operation on the residues identified by a ResidueSelector.
file	OperateOnResidueSubset.fwd.hh
	Forward declaration of a class that performs an operation on a packer task, in a configurable residue-specific manner.
file	OperateOnResidueSubset.hh
	Class, much like the OperateOnCertainResidues task operation, to apply a particular residue-level task operation on the residues identified by a ResidueSelector (Or a pre-selected set of residues).
file	OperateOnResidueSubsetCreator.hh
file	OptCysHG.cc
	run optH on non-disulfided bonded CYS only; meant to relieve any clashes caused by swapping of CYD->CYS after calling Conformation::detect_disulfides()
file	OptCysHG.fwd.hh
	forward declaration for OptCysHG
file	OptCysHG.hh
	run optH on non-disulfided bonded CYS only; meant to relieve any clashes caused by swapping of CYD->CYS after calling Conformation::detect_disulfides()
file	OptCysHGCreator.hh
file	OptH.cc
	run optH
file	OptH.fwd.hh
	forward declaration for OptH
file	OptH.hh
	run optH
file	OptHCreator.hh
file	parsing_utilities.cc
	Utility functions for extracting packer-related objects out of the DataMap.
file	parsing_utilities.hh
	Utility functions for extracting packer-related objects out of the DataMap.
file	ReplicateTask.cc
file	ReplicateTask.fwd.hh
	forward declaration for ReplicateTask
file	ReplicateTask.hh
file	ResFilter.fwd.hh
	Forward declaration of a class that takes a pose and a residue index, and returns true or false.
file	ResFilter.hh
	abstract base class that takes a pose and a residue index, and returns true or false
file	ResFilterCreator.fwd.hh
file	ResFilterCreator.hh
file	ResFilterCreators.hh
	Declaration for the class that connects ResFilters with the ResFilterFactory.
file	ResFilterFactory.cc
file	ResFilterFactory.fwd.hh
file	ResFilterFactory.hh
file	ResFilterRegistrator.hh
file	ResFilters.cc
file	ResFilters.fwd.hh
	core-level (very general) classes that take a pose and a residue index, and returns true or false
file	ResFilters.hh
	core-level (very general) classes that take a pose and a residue index, and return true or false
file	ResLvlTaskOperation.fwd.hh
	Forward declaration of a class that performs an operation on ResidueLevelTask usually by a TaskFactory right after the task's construction.
file	ResLvlTaskOperation.hh
	Class that performs an operation on ResidueLevelTask, usually by a PackerTaskFactory right after the task's construction.
file	ResLvlTaskOperationCreator.fwd.hh
file	ResLvlTaskOperationCreator.hh
file	ResLvlTaskOperationCreators.hh
	Declaration for the class that connects ResLvlTaskOperations with the ResLvlTaskOperationFactory.
file	ResLvlTaskOperationFactory.cc
file	ResLvlTaskOperationFactory.fwd.hh
file	ResLvlTaskOperationFactory.hh
file	ResLvlTaskOperationRegistrator.hh
file	ResLvlTaskOperations.cc
file	ResLvlTaskOperations.fwd.hh
	Forward declaration for core-level (very general) derived classes that wrap widely-used methods of the ResidueLevelTask interface. These are used by higher-level TaskOperations that allow the user to configure the behavior of PackerTasks that are created by TaskFactory.
file	ResLvlTaskOperations.hh
	core-level (very general) derived classes that wrap widely-used methods of the ResidueLevelTask interface. These are used by higher-level TaskOperations that allow the user to configure the behavior of PackerTasks that are created by TaskFactory.
file	RestrictInteractionGraphThreadsOperation.cc
	A task operation that restricts the number of threads allowed for interaction graph computation.
file	RestrictInteractionGraphThreadsOperation.fwd.hh
	A task operation that restricts the number of threads allowed for interaction graph computation.
file	RestrictInteractionGraphThreadsOperation.hh
file	RestrictInteractionGraphThreadsOperationCreator.hh
file	task_op_schemas.cc
	Utility functions for creating XML Schema definitions for TaskOperations.
file	task_op_schemas.hh
	Utility functions for creating XML Schema definitions for TaskOperations.
file	TaskOperation.cc
	An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction.
file	TaskOperation.fwd.hh
	Forward declaration of a class that performs an operation on a packer task, usually, by a PackerTaskFactory right after the task's construction.
file	TaskOperation.hh
	An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction.
file	TaskOperationCreator.fwd.hh
file	TaskOperationCreator.hh
file	TaskOperationCreators.hh
	Declaration for the class that connects TaskOperations with the TaskOperationFactory.
file	TaskOperationFactory.cc
file	TaskOperationFactory.fwd.hh
file	TaskOperationFactory.hh
file	TaskOperationRegistrator.hh
file	TaskOperations.cc
file	TaskOperations.fwd.hh
	Forward declaration of a class that performs an operation on a packer task, usually, by a PackerTaskFactory right after the task's construction.
file	TaskOperations.hh
	An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction This is an incomplete list. Freely define your own TaskOperation and hand it to a PackerTaskFactory.