- x -

• x() : core::fragment::BBTorsionSRFD , core::fragment::picking_old::vall::VallResidue , core::kinematics::tree::Atom , core::kinematics::tree::Atom_ , core::scoring::packing::Ball , core::sequence::Cell , protocols::frag_picker::VallResidue
• X() : protocols::frags::RMSVallData
• x0() : core::scoring::func::CircularHarmonicFunc , core::scoring::func::FlatHarmonicFunc , core::scoring::func::HarmonicFunc , core::scoring::func::MinMultiHarmonicFunc , core::scoring::func::SigmoidFunc , core::scoring::func::SquareWell2Func , core::scoring::func::SquareWellFunc , core::scoring::func::TopOutFunc
• x_range() : core::scoring::func::SquareWell2Func
• x_values() : protocols::stepwise::sampler::rigid_body::RigidBodyStepWiseSamplerValueRange
• xd() : core::scoring::methods::GoapEnergy
• xform() : core::scoring::mhc_epitope_energy::MHCEpitopeEnergySetup , core::scoring::motif::ResPairMotif
• XformScore() : core::scoring::motif::XformScore
• XfoxmScore() : protocols::sic_dock::XfoxmScore
• Xfrag() : core::scoring::motif::Xfrag
• XfragSet() : core::scoring::motif::XfragSet
• Xfres() : core::scoring::motif::Xfres
• xlab() : core::sequence::DP_Matrix
• xmax() : protocols::magnesium::SampleGrid
• xmin() : protocols::magnesium::SampleGrid
• xml_element_name() : protocols::parser::FragmentReader
• xml_schema_attributes() : core::pack::task::operation::ProhibitResidueProperties , core::pack::task::operation::ProhibitSpecifiedBaseResidueTypes , core::pack::task::operation::ReadResfile , core::pack::task::operation::RestrictToResidueProperties , core::pack::task::operation::RestrictToSpecifiedBaseResidueTypes
• xml_schema_complex_type_generator() : protocols::enzymatic_movers::EnzymaticMover
• XmlObjects() : protocols::rosetta_scripts::XmlObjects
• xn() : core::scoring::methods::GoapEnergy
• xnum_points() : core::scoring::geometric_solvation::GridInfo
• xorigin() : core::scoring::geometric_solvation::GridInfo
• xsd_architect_type_definition_w_attributes() : protocols::denovo_design::architects::DeNovoArchitectFactory
• xsd_constraint_generator_type_definition_w_attributes() : protocols::constraint_generator::ConstraintGeneratorFactory
• xsd_for_rosetta_scripts() : protocols::rosetta_scripts::RosettaScriptsParser
• xsd_type_definition_w_attributes() : protocols::ligand_docking::rdf::RDFFunctionFactory
• xsel() : core::io::rna::RDAT
• xsel_refine() : core::io::rna::RDAT
• xstep() : core::scoring::geometric_solvation::GridInfo
• XtalMLEnergy() : core::scoring::cryst::XtalMLEnergy
• XtalMLEnergyCreator() : core::scoring::cryst::XtalMLEnergyCreator
• xx_init() : core::optimization::MinimizerOptions
• xyz() : core::chemical::ICoorAtomID , core::chemical::MutableICoorRecord , core::conformation::Atom , core::conformation::Conformation , core::conformation::orbitals::OrbitalXYZCoords , core::conformation::PointGraphVertexData , core::conformation::Residue , core::io::ResidueInformation , core::kinematics::AtomTree , core::kinematics::tree::Atom , core::kinematics::tree::Atom_ , core::pose::MiniPose , core::pose::Pose , core::scoring::elec::electrie::ElecAtom , core::scoring::FACTSResidueInfo , core::scoring::func::FourPointsFunc , core::scoring::hbonds::graph::AtomInfo , core::scoring::hbonds::hbtrie::HBAtom , core::scoring::lkball::lkbtrie::LKBAtom , core::scoring::packing::Ball , core::scoring::packstat::CavityBall , core::scoring::PDatom , core::scoring::PDinter , core::scoring::PDvertex , core::scoring::power_diagram::PDinter , core::scoring::power_diagram::PDsphere , core::scoring::power_diagram::PDvertex , core::scoring::power_diagram::SAnode , core::scoring::SAnode , core::scoring::vdwaals::VDWAtom , protocols::md::MDBase , protocols::normalmode::NormalMode
• xyz2index_in_cell() : core::scoring::electron_density_atomwise::ElectronDensityAtomwise
• xyz_file() : protocols::recces::options::RECCES_Options
• xyz_step() : protocols::magnesium::MgScanner , protocols::magnesium::SampleGrid
• xyz_target() : core::scoring::constraints::LocalCoordinateConstraint
• XYZClaim() : protocols::environment::claims::XYZClaim
• XYZEvent() : core::conformation::signals::XYZEvent
• xyzStripeHashPose() : core::pose::xyzStripeHashPose
• xyzStripeHashPoseWithMeta() : protocols::sic_dock::xyzStripeHashPoseWithMeta