Here is a list of all class members with links to the classes they belong to:

- q -

• q() : core::scoring::FACTSRsdTypeInfo
• Q() : core::scoring::ResidualDipolarCoupling
• q1 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q2 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q3 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q4 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q5 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q6 : protocols::frag_picker::scores::GunnTuple , protocols::simple_moves::GunnTuple
• q_ : core::scoring::FACTSRsdTypeInfo , core::scoring::saxs::SAXSEnergy
• q_buffer : protocols::indexed_structure_store::search::StructureSingleQuery
• q_buffer_a : protocols::indexed_structure_store::search::StructurePairQuery
• q_buffer_b : protocols::indexed_structure_store::search::StructurePairQuery
• q_pos_ : protocols::frag_picker::quota::QuotaSelector
• qeps : core::scoring::elec::ElecGroup
• qfx : core::scoring::APBSResult
• qfy : core::scoring::APBSResult
• qfz : core::scoring::APBSResult
• qq_heavy_residue() : protocols::antibody::AntibodyInfo
• qq_light_residue() : protocols::antibody::AntibodyInfo
• Qs : protocols::simple_filters::SymmetricMotifFilter
• qsar_correlation() : protocols::ligand_docking::HighResEnsemble , protocols::ligand_docking::ProtLigEnsemble
• qsar_map_ : protocols::qsar::qsarMap , protocols::qsar::qsarMover , protocols::qsar::scoring_grid::GridSet
• qsarMap() : protocols::qsar::qsarMap
• qsarMover() : protocols::qsar::qsarMover
• qsarOptFunc() : protocols::qsar::qsarOptFunc
• qsarPoint() : protocols::qsar::qsarPoint
• quadratic_deriv_interpolation() : core::optimization::LineMinimizationAlgorithm
• quadratic_fract_out_of_bounds_func() : core::scoring::aa_composition_energy::AACompositionEnergySetup
• quadratic_interpolation() : core::optimization::LineMinimizationAlgorithm
• quadratic_out_of_bounds_func() : core::scoring::aa_composition_energy::AACompositionEnergySetup , core::scoring::netcharge_energy::NetChargeEnergySetup
• quadrupole() : core::scoring::MultipoleElecResidueInfo , core::scoring::MultipoleParameter
• quadrupole_ : core::scoring::MultipoleElecResidueInfo , core::scoring::MultipoleParameter
• quality() : protocols::frag_picker::PhiPsiTalosIO
• quality_class() : protocols::noesy_assign::CrossPeak
• quality_class_str() : protocols::noesy_assign::CrossPeak
• QualityClass : protocols::noesy_assign::CrossPeak
• quat() : protocols::ligand_docking::ga_ligand_dock::LigandConformer
• quat2U() : protocols::simple_filters::ResidueDepthCalculator
• quench() : core::pack::annealer::SimAnnealerBase
• quench_ : core::pack::annealer::SimAnnealerBase
• quench_mode_ : protocols::carbohydrates::GlycanTreeModeler
• quench_temp_ : protocols::moves::MonteCarlo
• Query : protocols::indexed_structure_store::search::PairQueryExecutor
• query : protocols::indexed_structure_store::search::PairQueryExecutor
• Query : protocols::indexed_structure_store::search::SingleQueryExecutor
• query : protocols::indexed_structure_store::search::SingleQueryExecutor
• query_ : protocols::frag_picker::scores::DisulfideIdentity , protocols::frag_picker::scores::HydrophobicityProfileSimilarity , protocols::frag_picker::scores::HydrophobicitySimilarity , protocols::frag_picker::scores::Phi , protocols::frag_picker::scores::ProlinePhiScore , protocols::frag_picker::scores::Psi , protocols::frag_picker::scores::RamaScore , protocols::frag_picker::scores::SecondaryIdentity , protocols::frag_picker::scores::SequenceIdentity , protocols::frag_picker::scores::SolventAccessibility
• query_bin_probs_ : protocols::frag_picker::scores::LAMBEGO_Similarity , protocols::frag_picker::scores::TorsionBinSimilarity
• query_class_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_cnt_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_coordinate_buffer : protocols::indexed_structure_store::search::PairQueryExecutor , protocols::indexed_structure_store::search::SingleQueryExecutor
• query_coordinate_com : protocols::indexed_structure_store::search::PairQueryExecutor , protocols::indexed_structure_store::search::SingleQueryExecutor
• query_d_phi_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_d_psi_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_dist_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_end_ : protocols::antibody_legacy::GraftOneMover
• query_index() : protocols::comparative_modeling::ExtraThreadingMover , protocols::comparative_modeling::ThreadingMover
• query_index_ : protocols::comparative_modeling::ExtraThreadingMover , protocols::comparative_modeling::ThreadingMover
• query_job_queen_for_more_jobs_for_current_node() : protocols::jd3::job_distributors::JobExtractor
• query_len_ : protocols::frag_picker::scores::ABEGO_SS_Score , protocols::frag_picker::scores::LAMBEGO_Similarity , protocols::frag_picker::scores::PartialSecondarySimilarity , protocols::frag_picker::scores::Psi , protocols::frag_picker::scores::SecondarySimilarity , protocols::frag_picker::scores::TalosSSSimilarity , protocols::frag_picker::scores::TorsionBinSimilarity
• query_length() : protocols::frag_picker::BoundedCollector< StrictWeakOrdering > , protocols::frag_picker::CandidatesCollector , protocols::frag_picker::GrabAllCollector , protocols::frag_picker::quota::ABEGO_SS_Pool , protocols::frag_picker::quota::QuotaCollector , protocols::frag_picker::quota::SecondaryStructurePool
• query_name() : protocols::task_operations::AlignedThreadOperation
• query_name_ : protocols::task_operations::AlignedThreadOperation
• query_names_ : protocols::protein_interface_design::filters::RmsdFilter
• query_phi_ : protocols::frag_picker::scores::PhiPsiRmsd , protocols::frag_picker::scores::PhiPsiSquareWell
• query_phi_prediction_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Phi
• query_phi_prediction_conf_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Phi
• query_position_i_ : protocols::frag_picker::nonlocal::NonlocalPair
• query_position_j_ : protocols::frag_picker::nonlocal::NonlocalPair
• query_positions_ : protocols::frag_picker::FragmentPicker
• query_profile_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::HydrophobicityProfileSimilarity , protocols::frag_picker::scores::ProfileScore , protocols::frag_picker::scores::ProfileScoreBlosum62 , protocols::frag_picker::scores::ProfileScoreDistWeight , protocols::frag_picker::scores::ProfileScoreL1 , protocols::frag_picker::scores::ProfileScoreStructL1
• query_psi_ : protocols::frag_picker::scores::PhiPsiRmsd , protocols::frag_picker::scores::PhiPsiSquareWell
• query_psi_prediction_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Psi
• query_psi_prediction_conf_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::Psi
• query_region() : protocols::simple_filters::DomainInterfaceFilter
• query_region_ : protocols::simple_filters::DomainInterfaceFilter
• query_region_str_ : protocols::simple_filters::DomainInterfaceFilter
• query_region_string() : protocols::simple_filters::DomainInterfaceFilter
• query_residue_depth_ : protocols::frag_picker::FragmentPicker , protocols::frag_picker::scores::FragmentCrmsdResDepth
• query_results : protocols::indexed_structure_store::DirectSegmentLookupResult , protocols::indexed_structure_store::search::PairQueryExecutor , protocols::indexed_structure_store::search::SingleQueryExecutor , protocols::indexed_structure_store::SegmentSequenceProfileResult
• query_s2_ : protocols::frag_picker::scores::PhiPsiSquareWell
• query_sa_prediction_ : protocols::frag_picker::FragmentPicker
• query_select_ : protocols::fold_from_loops::filters::RmsdFromResidueSelectorFilter , protocols::fold_from_loops::movers::AlignByResidueSelectorMover
• query_selector() : protocols::fold_from_loops::filters::RmsdFromResidueSelectorFilter , protocols::fold_from_loops::movers::AlignByResidueSelectorMover
• query_seq_as_string_ : protocols::frag_picker::FragmentPicker
• query_sequence() : protocols::abinitio::Template
• query_sequence_ : protocols::frag_picker::scores::FragmentAllAtomCrmsd , protocols::frag_picker::scores::ProfileScoreDistWeight
• query_size_ : protocols::frag_picker::scores::AtomBasedConstraintsScore
• query_ss_ : protocols::frag_picker::scores::ProfileScoreDistWeight , protocols::frag_picker::scores::RamaScore , protocols::frag_picker::scores::SecondarySimilarity , protocols::frag_picker::scores::TalosSSSimilarity
• query_ss_as_string_ : protocols::frag_picker::FragmentPicker
• query_ss_profile_ : protocols::frag_picker::FragmentPicker
• query_start_ : protocols::antibody_legacy::GraftOneMover
• query_stats : protocols::indexed_structure_store::DirectSegmentLookup , protocols::indexed_structure_store::search::PairQueryExecutor , protocols::indexed_structure_store::search::SingleQueryExecutor , protocols::indexed_structure_store::SegmentSequenceProfile
• queryResidueIndex_ : protocols::frag_picker::FragmentCandidate
• QueryResult : protocols::indexed_structure_store::search::PairQueryExecutor , protocols::indexed_structure_store::search::SingleQueryExecutor
• querytag_ : protocols::jd2::CompareTags
• queue_ : protocols::electron_density::ResultDB< T, Tcomp >
• queue_batch() : protocols::jd2::archive::ArchiveManager , protocols::jd2::archive::BaseArchiveManager
• queue_for_annotation() : protocols::environment::claims::EnvClaim
• queue_head_ : protocols::match::output::UpstreamHitCacher
• queue_initial_digraph_nodes_and_jobs() : protocols::jd3::job_distributors::JobExtractor
• QueueType : protocols::network::NetworkQueue
• quick() : protocols::simple_filters::ContactMolecularSurfaceFilter , protocols::simple_filters::ShapeComplementarityFilter
• quick_ : protocols::simple_filters::ContactMolecularSurfaceFilter , protocols::simple_filters::ShapeComplementarityFilter
• quick_alignment_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_pose_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_pose_is_intialized_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_alignment_tag_ : protocols::stepwise::legacy::modeler::rna::StepWiseRNA_Clusterer
• quick_and_dirty_ : protocols::motifs::LigandMotifSearch , protocols::motifs::MotifSearch
• quick_and_dirty_heavy_atom_is_unsat() : protocols::hbnet::HBNet
• quick_and_dirty_network_has_heavy_atom_unsat() : protocols::hbnet::HBNet
• quick_closure() : protocols::seeded_abinitio::CloseFold
• QuickRelaxPartnersSeparately() : protocols::docking::membrane::QuickRelaxPartnersSeparately
• QuickRepacker() : protocols::pack_daemon::QuickRepacker
• quota_fraction_ : protocols::frag_picker::quota::QuotaPool
• quota_protocol() : protocols::frag_picker::FragmentPicker
• quota_score() : protocols::frag_picker::quota::ABEGO_SS_Pool , protocols::frag_picker::quota::QuotaPool , protocols::frag_picker::quota::SecondaryStructurePool
• QuotaCollector() : protocols::frag_picker::quota::QuotaCollector
• QuotaConfig() : protocols::frag_picker::quota::QuotaConfig
• QuotaDebug() : protocols::frag_picker::QuotaDebug
• QuotaPool() : protocols::frag_picker::quota::QuotaPool
• QuotaSelector() : protocols::frag_picker::quota::QuotaSelector