Here is a list of all namespace members with links to the namespace documentation for each member:

- v -

• V : core::chemical::element
• val : protocols::hybridization
• validate_loop_start_stop() : protocols::loops
• valide_include_only_stage() : protocols::scoring::methods::pcs2
• vall_library_from_file() : core::fragment::picking_old::vall
• VallChunkAP : protocols::frag_picker
• VallChunkCAP : protocols::frag_picker
• VallChunkCOP : protocols::frag_picker
• VallChunkFilterCOP : protocols::frag_picker
• VallChunkFilterOP : protocols::frag_picker
• VallChunkOP : protocols::frag_picker
• VallFragmentEvalAP : core::fragment::picking_old::vall::eval
• VallFragmentEvalCAP : core::fragment::picking_old::vall::eval
• VallFragmentEvalCOP : core::fragment::picking_old::vall::eval
• VallFragmentEvalOP : core::fragment::picking_old::vall::eval
• VallFragmentGenAP : core::fragment::picking_old::vall::gen
• VallFragmentGenCAP : core::fragment::picking_old::vall::gen
• VallFragmentGenCOP : core::fragment::picking_old::vall::gen
• VallFragmentGenOP : core::fragment::picking_old::vall::gen
• VallProviderAP : protocols::frag_picker
• VallProviderCAP : protocols::frag_picker
• VallProviderCOP : protocols::frag_picker
• VallProviderOP : protocols::frag_picker
• VallResidueCOP : protocols::frag_picker
• VallResidueOP : protocols::frag_picker
• value_attribute_type_for_option() : protocols::jd3::chunk_library , protocols::jd3::full_model , protocols::jd3
• VanillaJobDistributorCOP : protocols::jd3
• VanillaJobDistributorOP : protocols::jd3
• VariableVectorExpressionCOP : protocols::pack_daemon
• VariableVectorExpressionOP : protocols::pack_daemon
• VarianceStatisticsArchiveCOP : protocols::jd2::archive
• VarianceStatisticsArchiveOP : protocols::jd2::archive
• VARIANT_MAP() : core::chemical
• variants : update_ResidueType_enum_files
• variants_match() : core::chemical
• variants_match_with_exceptions() : core::chemical
• VariantType : core::chemical
• VarLengthBuildAP : protocols::forge::components
• VarLengthBuildCAP : protocols::forge::components
• VarLengthBuildCOP : protocols::forge::components
• VarLengthBuildOP : protocols::forge::components
• VarSolDistSasaCalculatorAP : protocols::vardist_solaccess
• VarSolDistSasaCalculatorCAP : protocols::vardist_solaccess
• VarSolDistSasaCalculatorCOP : protocols::vardist_solaccess
• VarSolDistSasaCalculatorOP : protocols::vardist_solaccess
• VarSolDRotamerDotsCOP : protocols::vardist_solaccess
• VarSolDRotamerDotsOP : protocols::vardist_solaccess
• VaryLoopLengthMoverCOP : protocols::stepwise::monte_carlo::mover
• VaryLoopLengthMoverOP : protocols::stepwise::monte_carlo::mover
• VD : core::chemical
• VDs : core::chemical
• VdTreeatomMap : core::chemical
• vdw : core::scoring
• VDW_ATR_REP : protocols::stepwise::screener
• VDW_BIN : protocols::stepwise::screener
• VDW_BinScreenerCOP : protocols::stepwise::screener
• VDW_BinScreenerOP : protocols::stepwise::screener
• vdw_cached_rep_screen_info_is_setup() : protocols::scoring
• VDW_CachedRepScreenInfoCOP : protocols::scoring
• VDW_CachedRepScreenInfoOP : protocols::scoring
• VDW_EnergyCreator_registrator : core::init
• VDW_FRAG_STORE : protocols::loops::loop_closure::ccd
• VDW_GridCOP : core::pose::rna
• VDW_GridOP : core::pose::rna
• vdw_method : core::scoring::methods
• VDW_RepScreenInfoCOP : core::pose::rna
• VDW_RepScreenInfoOP : core::pose::rna
• vdw_res_data : core::scoring
• vdw_respair_data : core::scoring
• vdw_scale_factor() : core::scoring::methods
• vdw_tinker_lr : core::scoring::methods
• VDW_WEIGHT() : protocols::anchored_design
• VDWRotamerTrieCOP : core::scoring::vdwaals
• VDWRotamerTrieOP : core::scoring::vdwaals
• VdWShouldItCount() : core::scoring
• VDWTINKER_ROTAMER_SET_INFO : core::conformation::RotamerSetCacheableDataType
• VdWTinkerEnergyCreator_registrator : core::init
• VdWTinkerPoseInfoCOP : core::scoring
• VdWTinkerPoseInfoOP : core::scoring
• VdWTinkerPotentialCOP : core::scoring
• VdWTinkerPotentialOP : core::scoring
• VdWTinkerResidueInfoCOP : core::scoring
• VdWTinkerResidueInfoOP : core::scoring
• VdWTinkerResPairMinDataCOP : core::scoring::methods
• VdWTinkerResPairMinDataOP : core::scoring::methods
• VdWTinkerRotamerSetInfoOP : core::scoring
• Vec : core::conformation::symmetry , core::pose::motif , core::scoring::motif , protocols::kinmatch , protocols::matdes , protocols::scoring , protocols::sic_dock::scores , protocols::sic_dock
• Vec3 : protocols::sparta
• vec3_to_stub() : protocols::sic_dock
• Vec5 : core::scoring::nmr
• Vecs : protocols::kinmatch , protocols::sic_dock::scores , protocols::sic_dock
• VecSize : protocols::fldsgn
• Vector : core::scoring::power_diagram , core::scoring::rna::data , core::scoring , core , protocols::fldsgn::potentials::sspot , protocols::hotspot_hashing , protocols::rna::denovo , protocols::toolbox
• vector1_remove() : core::scoring
• vector1_size : core::environment
• vector2disk_in1d() : protocols::recces
• vector2disk_in2d() : protocols::recces
• Vector2DSize : protocols::antibody
• vector_has_n_trues() : protocols::multistage_rosetta_scripts::cluster
• vector_map_to_comma_strings() : core::conformation::symmetry
• vector_to_comma_strings() : core::conformation::symmetry
• vector_to_rank() : protocols::ligand_docking
• vector_vector_to_FArray2() : protocols::seeded_abinitio , protocols::toolbox
• VectorExpressionCOP : protocols::pack_daemon
• VectorExpressionCreatorCOP : protocols::pack_daemon
• VectorExpressionCreatorOP : protocols::pack_daemon
• VectorExpressionOP : protocols::pack_daemon
• VectorFunctionCOP : protocols::pack_daemon
• VectorFunctionOP : protocols::pack_daemon
• VectorPoseFilterCOP : protocols::filters
• VectorPoseFilterOP : protocols::filters
• VectorPoseJobDistributorCOP : protocols::jd2
• VectorPoseJobDistributorOP : protocols::jd2
• VectorPoseMoverCOP : protocols::moves
• VectorPoseMoverOP : protocols::moves
• VectorQuad : core::optimization
• VecVecSize : protocols::fldsgn
• verify_stage_ID() : protocols::abinitio::abscript
• vertex_exists() : protocols::forge::methods
• VERTEX_OFF : protocols::viewer
• vertex_xyz_from_generators() : core::scoring::power_diagram
• VH_sheet_1 : protocols::antibody
• VH_sheet_2 : protocols::antibody
• VicinityPerturberCOP : protocols::kinematic_closure::perturbers
• VicinityPerturberOP : protocols::kinematic_closure::perturbers
• VicinitySamplingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
• VicinitySamplingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
• viewer_main() : protocols::viewer
• VirtResClaimAP : protocols::environment::claims
• VirtResClaimCAP : protocols::environment::claims
• VirtResClaimCOP : protocols::environment::claims
• VirtResClaimOP : protocols::environment::claims
• VirtResClaims : protocols::environment::claims
• VIRTUAL_ATOM : core::chemical
• VIRTUAL_BACKBONE_EXCEPT_C1PRIME : core::chemical
• VIRTUAL_BASE : core::chemical
• VIRTUAL_BASE_HEAVY_ATOM : core::chemical
• VIRTUAL_BB : core::chemical
• VIRTUAL_DNA_PHOSPHATE : core::chemical
• VIRTUAL_METAL_CONJUGATION : core::chemical
• VIRTUAL_NTERM : core::chemical
• VIRTUAL_O2PRIME_HYDROGEN : core::chemical
• VIRTUAL_PHOSPHATE : core::chemical
• VIRTUAL_RESIDUE : core::chemical
• VIRTUAL_RESIDUE_VARIANT : core::chemical
• VIRTUAL_RIBOSE : core::chemical
• VIRTUAL_RNA_RESIDUE : core::chemical
• VIRTUAL_RNA_RESIDUE_EXCLUDE_PHOSPHATE : core::chemical
• VIRTUAL_SIDE_CHAIN : core::chemical
• virtual_type_for_conf() : core::conformation
• virtual_type_for_pose() : core::pose
• VirtualCoordinateCOP : core::conformation::symmetry
• VirtualCoordinateOP : core::conformation::symmetry
• VIRTUALIZABLE_BY_PACKER : core::chemical
• virtualize_5prime_phosphates() : core::pose::rna
• virtualize_bulges() : protocols::rna::denovo
• virtualize_free_rna_moieties() : core::pose::rna
• virtualize_side_chains() : protocols::stepwise::modeler
• VirtualRootMoverCOP : protocols::simple_moves
• VirtualRootMoverOP : protocols::simple_moves
• VirtualSugarJustInTimeInstantiatorCOP : protocols::stepwise::modeler::rna::sugar
• VirtualSugarJustInTimeInstantiatorOP : protocols::stepwise::modeler::rna::sugar
• VirtualSugarSamplerFromStringListCOP : protocols::stepwise::modeler::rna::sugar
• VirtualSugarSamplerFromStringListOP : protocols::stepwise::modeler::rna::sugar
• VirtualToFaMoverCOP : protocols::simple_moves
• VirtualToFaMoverOP : protocols::simple_moves
• visit_atomtree_node() : protocols::viewer
• VISITED : protocols::simple_moves
• VISITED_HILL : protocols::simple_moves
• visualize_fold_tree() : core::kinematics
• VisualizeEmbeddingMoverCOP : protocols::membrane::visualize
• VisualizeEmbeddingMoverOP : protocols::membrane::visualize
• VisualizeMembraneMoverCOP : protocols::membrane::visualize
• VisualizeMembraneMoverOP : protocols::membrane::visualize
• VIter : core::chemical
• VIterPair : core::chemical
• VL_sheet_1 : protocols::antibody
• VL_sheet_2 : protocols::antibody
• vl_vh_orientation_coords() : protocols::antibody
• VLBInstructionType : protocols::protein_interface_design::movers
• VMaxCOP : protocols::pack_daemon
• VMaxOP : protocols::pack_daemon
• VMinCOP : protocols::pack_daemon
• VMinOP : protocols::pack_daemon
• VoidFunc : protocols::viewer
• voids_penalty : core::scoring
• VoidsPenaltyEnergyCOP : core::pack::guidance_scoreterms::voids_penalty_energy
• VoidsPenaltyEnergyCreator_registrator : core::init
• VoidsPenaltyEnergyOP : core::pack::guidance_scoreterms::voids_penalty_energy
• VoidsPenaltyVoxelGridCOP : core::pack::guidance_scoreterms::voids_penalty_energy
• VoidsPenaltyVoxelGridOP : core::pack::guidance_scoreterms::voids_penalty_energy
• Volume : core
• volumepixel : core::scoring::atomic_depth
• voxel : core::scoring::atomic_depth
• voxel2 : core::scoring::atomic_depth
• VoxelGridPoint_AAAP : core::scoring::nmr
• VoxelGridPoint_AACAP : core::scoring::nmr
• VoxelGridPoint_AACOP : core::scoring::nmr
• VoxelGridPoint_AAOP : core::scoring::nmr
• VoxelGridPointAP : core::scoring::nmr
• VoxelGridPointCAP : core::scoring::nmr
• VoxelGridPointCOP : core::scoring::nmr
• VoxelGridPointOP : core::scoring::nmr
• VRT1 : core::chemical
• VRT_LABEL_OPTION : protocols::environment::claims