schema.Job Class Reference

Inheritance diagram for schema.Job:

Public Member Functions
def	__repr__ (self)
def	age (self)
def	duration (self)
def	protein (self)
def	name (self)
def	loop (self)
Public Member Functions inherited from Base
void	foo ()
void	maybe ()
virtual void	f_v ()
virtual void	f_v_2 ()
virtual void	foo_void ()
virtual void	foo_void_pure ()=0
virtual int	foo_int ()
virtual std::string	foo_sring ()
virtual std::string &	foo_sring_r ()
virtual void	foo ()
Public Member Functions inherited from utility::VirtualBase
	VirtualBase ()=default
	Default constructor. More...
virtual	~VirtualBase ()=default
	The virtual destructor is one of the main reasons for the VirtualBase class. More...
	VirtualBase (VirtualBase const &)=default
	VirtualBase (VirtualBase &&)=default
VirtualBase &	operator= (VirtualBase const &)=default
VirtualBase &	operator= (VirtualBase &&)=default

Static Public Attributes
	id = Column(BigInteger, primary_key=True)
	command = Column(Text)
	revision = Column(Text)
	algorithm = Column(Text)
	start_time = Column(Text)
	stop_time = Column(Text)
	input_file = Column(Text)
	loop_begin = Column(Integer)
	loop_end = Column(Integer)
	iterations = Column(Integer)
	frames = Column(Integer)
	description = Column(Text)
	moves = relationship('Move', backref='job')
	temperatures = relationship('Temperature', backref='job')
	trajectories = relationship('Trajectory', backref='job')
	numpy_caches = relationship('NumpyCache', backref='job')

Static Private Attributes
string	__tablename__ = 'jobs'

Additional Inherited Members
Public Attributes inherited from Base
std::string	s_
struct {
int   a
float   b
};
Protected Member Functions inherited from Base
virtual void	foo_protected ()
Protected Attributes inherited from Base
int	data

Member Function Documentation

__repr__()

def schema.Job.__repr__

(

self

)

References schema.Job.id, numeric::ClusteringTreeNode.id(), utility::keys::UserKey< O, S, C >.id(), utility::keys::VariantKey< K >.id(), utility::options::VariantOption< O >.id(), binder::Binder.id(), utility::options::Option.id(), binder::ClassBinder.id(), binder::EnumBinder.id(), detail::named_arg_info< Char >.id, detail::named_arg_info< char_type >.id, utility::keys::Key.id(), binder::FunctionBinder.id(), utility::keys::AutoKey< O, S, C >.id(), utility::keys::AutoKey< Option >.id(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.id(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.id(), utility::options::ScalarOption_T_< K, T >.id(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.id(), utility::options::ScalarOption_T_< AnyOptionKey, T >.id(), utility::options::ScalarOption_T_< RealOptionKey, double >.id(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.id(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.id(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.id(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.id(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.id(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.id(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.id(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.id(), utility::options::VectorOption_T_< K, T >.id(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.id(), and utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.id().

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__name__().

age()

def schema.Job.age

(

self

)

References helpers.plural, schema.Job.stop_time, and ObjexxFCL.strip().

duration()

def schema.Job.duration

(

self

)

References schema.Job.start_time, pyrosetta.distributed.utility.log.ProgressLogger.start_time, schema.Job.stop_time, and ObjexxFCL.strip().

loop()

def schema.Job.loop

(

self

)

References schema.Job.loop_begin, and schema.Job.loop_end.

name()

def schema.Job.name

(

self

)

References schema.Job.protein(), and arls_impl.DockingCase.protein.

Referenced by pyrosetta.distributed.docs.ComponentDoc.__repr__(), options_class.Option.getCName(), options_class.Option.getDoxygenRow(), options_class.Option.getMarkdownRow(), options_class.Option.getOptionKeysCC(), options_class.Option.getWikiTableRow(), enumerate_junctions.DHR.print(), enumerate_junctions.DHR.to_component(), and enumerate_junctions.DHR.write_to_file().

protein()

def schema.Job.protein

(

self

)

References basename, and schema.Job.input_file.

Referenced by schema.Job.name().

Member Data Documentation

__tablename__

string schema.Job.__tablename__ = 'jobs'

staticprivate

algorithm

schema.Job.algorithm = Column(Text)

static

command

schema.Job.command = Column(Text)

static

Referenced by job_manager.CommandRunner.__str__(), pyrosetta.distributed.viewer.modules.setStyle.apply(), job_manager.CommandRunner.dump(), and job_manager.CommandLauncher.run().

description

schema.Job.description = Column(Text)

static

frames

schema.Job.frames = Column(Integer)

static

id

schema.Job.id = Column(BigInteger, primary_key=True)

static

Referenced by schema.Job.__repr__().

input_file

schema.Job.input_file = Column(Text)

static

Referenced by schema.Job.protein().

iterations

schema.Job.iterations = Column(Integer)

static

Referenced by pyrosetta.distributed.utility.log.ProgressLogger.increment().

loop_begin

schema.Job.loop_begin = Column(Integer)

static

Referenced by schema.Job.loop().

loop_end

schema.Job.loop_end = Column(Integer)

static

Referenced by schema.Job.loop().

moves

schema.Job.moves = relationship('Move', backref='job')

static

numpy_caches

schema.Job.numpy_caches = relationship('NumpyCache', backref='job')

static

revision

schema.Job.revision = Column(Text)

static

start_time

schema.Job.start_time = Column(Text)

static

Referenced by schema.Job.duration().

stop_time

schema.Job.stop_time = Column(Text)

static

Referenced by schema.Job.age(), and schema.Job.duration().

temperatures

schema.Job.temperatures = relationship('Temperature', backref='job')

static

trajectories

schema.Job.trajectories = relationship('Trajectory', backref='job')

static

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The documentation for this class was generated from the following file:

• src/apps/pilot/kale/native_ensemble/analysis/schema.py