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    Rosetta
    
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#include <utility/json_utilities.hh>#include <core/types.hh>#include <basic/options/option.hh>#include <protocols/viewer/viewers.hh>#include <core/pose/Pose.hh>#include <devel/init.hh>#include <utility/vector1.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <core/scoring/ScoreFunction.fwd.hh>#include <core/chemical/ChemicalManager.hh>#include <core/chemical/ResidueTypeSet.fwd.hh>#include <core/id/TorsionID.hh>#include <core/kinematics/MoveMap.hh>#include <core/pose/annotated_sequence.hh>#include <core/pack/task/TaskFactory.hh>#include <core/pack/task/operation/TaskOperation.fwd.hh>#include <core/pack/task/operation/TaskOperations.hh>#include <protocols/moves/TrialMover.hh>#include <protocols/moves/MonteCarlo.hh>#include <protocols/moves/MoverContainer.hh>#include <protocols/moves/RepeatMover.hh>#include <protocols/minimization_packing/MinMover.hh>#include <protocols/minimization_packing/RotamerTrialsMinMover.hh>#include <protocols/simple_moves/RandomTorsionMover.hh>#include <basic/Tracer.hh>#include <iostream>#include <basic/options/keys/out.OptionKeys.gen.hh>#include <basic/options/keys/in.OptionKeys.gen.hh>#include <utility/excn/Exceptions.hh>Functions | |
| void | aramid_main () | 
| void * | my_main (void *) | 
| int | main (int argc, char *argv[]) | 
Variables | |
| static basic::Tracer | TR ("apps.pilot.awatkins.aramid_folding") | 
| void aramid_main | ( | ) | 
References create_a3b_hbs::ii, beta_nonlocal::jj, mc, test.T400_Refinement::minmover, basic::options::OptionKeys::MonteCarlo::MonteCarlo, basic::options::OptionKeys::in::file::movemap, orn_macrocycle::pert_trial, beta_nonlocal::pose, beta_nonlocal::rts, test.T120_core::sfxn, vancomycin::task, and TR.
Referenced by my_main().
| int main | ( | int | argc, | 
| char * | argv[] | ||
| ) | 
References argv, utility::io::oc::cout, test.T009_Exceptions::e, in::file::fasta(), basic::init(), in::file::input_res(), my_main(), in::file::native(), out::nstruct(), option, out::overwrite(), kmeans_adaptive_kernel_density_bb_dependent_rotlib::p, pyrosetta.distributed.io::pose_from_pdbstring(), out::file::silent(), and viewer_main().
| void* my_main | ( | void * | ) | 
References aramid_main(), and utility::options::OptionKeys::options::exit.
Referenced by main().
      
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  static | 
Referenced by aramid_main().