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Rosetta
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#include <protocols/moves/MonteCarlo.hh>#include <protocols/moves/Mover.hh>#include <protocols/minimization_packing/PackRotamersMover.hh>#include <protocols/moves/rigid_body_moves.hh>#include <protocols/loops/ccd_closure.hh>#include <protocols/relax_protocols.hh>#include <core/types.hh>#include <core/scoring/sasa.hh>#include <basic/prof.hh>#include <core/chemical/AtomTypeSet.hh>#include <core/chemical/MMAtomTypeSet.hh>#include <core/chemical/AA.hh>#include <core/conformation/Residue.hh>#include <core/chemical/ResidueTypeSet.hh>#include <core/chemical/ResidueTypeSelector.hh>#include <core/conformation/ResidueFactory.hh>#include <core/chemical/VariantType.hh>#include <core/scoring/etable/Etable.hh>#include <core/scoring/ScoreFunction.hh>#include <core/scoring/Ramachandran.hh>#include <core/pack/dunbrack/RotamerLibrary.hh>#include <core/scoring/hbonds/HBondSet.hh>#include <core/scoring/hbonds/hbonds.hh>#include <core/scoring/etable/count_pair/CountPairFunction.hh>#include <core/pack/rotamer_trials.hh>#include <core/pack/pack_rotamers.hh>#include <core/pack/task/PackerTask.hh>#include <core/pack/task/TaskFactory.hh>#include <core/kinematics/FoldTree.hh>#include <core/kinematics/MoveMap.hh>#include <core/id/AtomID_Map.hh>#include <core/mm/MMTorsionLibrary.hh>#include <core/mm/MMTorsionLibrary.fwd.hh>#include <core/optimization/AtomTreeMinimizer.hh>#include <core/optimization/MinimizerOptions.hh>#include <core/pose/Pose.hh>#include <basic/options/option.hh>#include <basic/options/after_opts.hh>#include <basic/basic.hh>#include <basic/database/open.hh>#include <devel/init.hh>#include <core/io/pdb/pdb_writer.hh>#include <utility/vector1.hh>#include <utility/excn/Exceptions.hh>#include <numeric/xyzVector.hh>#include <numeric/random/random.hh>#include <ObjexxFCL/format.hh>#include <ObjexxFCL/string.functions.hh>#include <fstream>#include <iostream>#include <string>#include <core/import_pose/import_pose.hh>#include <basic/Tracer.hh>Functions | |
| int | main (int argc, char *argv[]) |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
References argv, utility::io::oc::cerr, utility::io::oc::cout, spectral_cluster_kmeans_adaptive_kernel_density_bb_dependent_rotlib::D, test.T009_Exceptions::e, basic::init(), beta_nonlocal::mm, options, PHI, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, oop_conformations::scorefxn, basic::options::OptionKeys::frags::scoring::scoring, and THETA.