superdev.cc File Reference

#include <core/types.hh>
#include <devel/init.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <core/scoring/rms_util.hh>
#include <core/pose/util.hh>
#include <core/pose/init_id_map.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/Mover.fwd.hh>
#include <protocols/jobdist/not_universal_main.hh>
#include <utility/vector1.hh>
#include <core/id/AtomID_Map.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>
#include <utility/io/ozstream.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <algorithm>
#include <utility/excn/Exceptions.hh>

Classes
class	SuperDeviationMover

Typedefs
using	SuperDeviationMoverOP = utility::pointer::shared_ptr< SuperDeviationMover >

Functions
core::Real	calc_min (utility::vector1< core::Real > const &n)
core::Real	calc_median (utility::vector1< core::Real > const &n)
int	main (int argc, char *argv[])

Detailed Description

Author

James Thompson

Typedef Documentation

SuperDeviationMoverOP

using SuperDeviationMoverOP = utility::pointer::shared_ptr<SuperDeviationMover>

Function Documentation

calc_median()

core::Real calc_median

(

utility::vector1< core::Real > const &

n

)

References count, and kmeans_adaptive_kernel_density_bb_dependent_rotlib::n.

Referenced by SuperDeviationMover::print_stats().

calc_min()

core::Real calc_min

(

utility::vector1< core::Real > const &

n

)

References kmeans_adaptive_kernel_density_bb_dependent_rotlib::n.

Referenced by SuperDeviationMover::print_stats().

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, basic::options::OptionKeys::chemical::chemical, test.T009_Exceptions::e, basic::init(), in::file::native(), docking::native_pose, option, pyrosetta.distributed.io::pose_from_file, and SuperDeviationMover::SuperDeviationMover().