hbscan Namespace Reference

Variables
basic::options::StringOptionKey	tag ("hbscan:tag")
basic::options::RealOptionKey	repeat ("hbscan:repeat")
basic::options::IntegerOptionKey	nloop_hbscan ("hbscan:nloop_hbscan")
basic::options::RealOptionKey	hbond_sc_cutoff ("hbscan:hbond_sc_cutoff")
basic::options::RealOptionKey	fa_rep_cutoff ("hbscan:fa_rep_cutoff")
basic::options::IntegerOptionKey	lig_seqpos ("hbscan:lig_seqpos")
basic::options::StringOptionKey	restypes ("hbscan:restypes")
basic::options::IntegerOptionKey	lig_min_atom_sep ("hbscan:lig_min_atom_sep")
basic::options::RealOptionKey	hbond_wtd_energy_cutoff ("hbscan:hbond_wtd_energy_cutoff")
basic::options::BooleanOptionKey	write_cst_file ("hbscan:write_cst_file")

Variable Documentation

fa_rep_cutoff

basic::options::RealOptionKey hbscan::fa_rep_cutoff("hbscan:fa_rep_cutoff")

(

"hbscan:fa_rep_cutoff"

)

Referenced by initialize_rigid_body_sampler(), main(), and scan_hbond_jumps().

hbond_sc_cutoff

basic::options::RealOptionKey hbscan::hbond_sc_cutoff("hbscan:hbond_sc_cutoff")

(

"hbscan:hbond_sc_cutoff"

)

Referenced by main(), and scan_hbond_jumps().

hbond_wtd_energy_cutoff

basic::options::RealOptionKey hbscan::hbond_wtd_energy_cutoff("hbscan:hbond_wtd_energy_cutoff")

(

"hbscan:hbond_wtd_energy_cutoff"

)

Referenced by get_n_hbonds_from_pair(), main(), and scan_hbond_jumps().

lig_min_atom_sep

basic::options::IntegerOptionKey hbscan::lig_min_atom_sep("hbscan:lig_min_atom_sep")

(

"hbscan:lig_min_atom_sep"

)

Referenced by get_n_hbonds_from_pair(), main(), and scan_hbond_jumps().

lig_seqpos

basic::options::IntegerOptionKey hbscan::lig_seqpos("hbscan:lig_seqpos")

(

"hbscan:lig_seqpos"

)

Referenced by byres_analysis(), get_n_hbonds_from_pair(), and main().

nloop_hbscan

basic::options::IntegerOptionKey hbscan::nloop_hbscan("hbscan:nloop_hbscan")

(

"hbscan:nloop_hbscan"

)

Referenced by main().

repeat

basic::options::RealOptionKey hbscan::repeat("hbscan:repeat")

(

"hbscan:repeat"

)

Referenced by load_coords(), and main().

restypes

basic::options::StringOptionKey hbscan::restypes("hbscan:restypes")

(

"hbscan:restypes"

)

Referenced by build_polymer(), byres_analysis(), collect_residue_types(), load_as_fullatom(), main(), output_residue_types(), and rna_design_test().

tag

basic::options::StringOptionKey hbscan::tag("hbscan:tag")

(

"hbscan:tag"

)

Referenced by byres_analysis(), and main().

write_cst_file

basic::options::BooleanOptionKey hbscan::write_cst_file("hbscan:write_cst_file")

(

"hbscan:write_cst_file"

)

Referenced by main(), and scan_hbond_jumps().