r_check_chainbreak.cc File Reference

#include <protocols/jobdist/JobDistributors.hh>
#include <protocols/jobdist/Jobs.hh>
#include <protocols/abinitio/AbrelaxApplication.hh>
#include <protocols/abinitio/ClassicAbinitio.hh>
#include <protocols/abinitio/FoldConstraints.hh>
#include <protocols/abinitio/JumpingFoldConstraints.hh>
#include <protocols/relax_protocols.hh>
#include <protocols/jumping/SheetBuilder.hh>
#include <protocols/jumping/JumpSetup.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <protocols/jumping/SecondaryStructure.hh>
#include <utility/excn/Exceptions.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <basic/options/option.hh>
#include <basic/options/after_opts.hh>
#include <core/fragment/ConstantLengthFragSet.hh>
#include <core/fragment/BBTorsionSRFD.hh>
#include <core/fragment/util.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/func/HarmonicFunc.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/io/silent/silent.fwd.hh>
#include <core/io/silent/ProteinSilentStruct.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/func/Func.hh>
#include <core/scoring/rms_util.hh>
#include <devel/init.hh>
#include <core/sequence/util.hh>
#include <protocols/evaluation/PoseEvaluator.hh>
#include <protocols/evaluation/RmsdEvaluator.hh>
#include <protocols/evaluation/JumpEvaluator.hh>
#include <protocols/evaluation/PCA.hh>
#include <numeric/random/random.hh>
#include <basic/options/option_macros.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>
#include <cstdlib>
#include <string>
#include <vector>
#include <core/scoring/constraints/BoundConstraint.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>
#include <core/util/SwitchResidueTypeSet.hh>

Classes
class	protocols::abinitio::Application

Namespaces
	protocols
	demo program for implementing loop relax + FA relax
	protocols::abinitio

Functions
int	main (int argc, char **argv)

Variables
static basic::Tracer	protocols::abinitio::tr ("main")

Function Documentation

main()

int main	(	int	argc,
		char **	argv
	)

References job_manager::app, argv, basic::options::OptionKeys::in::path::database, test.T009_Exceptions::e, basic::init(), basic::options::option, and protocols::abinitio::Application::register_options().