rna_decompose Namespace Reference

Variables
	file_path = os.path.split( os.path.abspath(__file__) ) [0]
	input_pdb = sys.argv[1]
	total_res = get_total_res(input_pdb)
	n_chunk = int(total_res / 100.0 + 0.5)
	res_slice_list = pdb_slice_into_chunks(input_pdb, n_chunk)
int	current_chunk = 1

Variable Documentation

current_chunk

int rna_decompose.current_chunk = 1

file_path

rna_decompose.file_path = os.path.split( os.path.abspath(__file__) ) [0]

input_pdb

rna_decompose.input_pdb = sys.argv[1]

Referenced by devel_main(), main(), my_main(), protocols_main(), and protocols::abinitio::JumpSpecificAbrelax.setup_fold().

n_chunk

rna_decompose.n_chunk = int(total_res / 100.0 + 0.5)

res_slice_list

rna_decompose.res_slice_list = pdb_slice_into_chunks(input_pdb, n_chunk)

total_res

rna_decompose.total_res = get_total_res(input_pdb)

Referenced by apply_torsion_set(), get_torsion_set(), hermann_phase_two_minimize(), lariat_modeling(), post_rebuild_bulge_assembly(), and trim_pdb().