model_antibody_basic.cc File Reference

#include <protocols/jd2/JobDistributor.hh>
#include <basic/options/util.hh>
#include <devel/init.hh>
#include <protocols/viewer/viewers.hh>
#include <protocols/antibody/design/AntibodyDesignMoverGenerator.hh>
#include <protocols/antibody/AntibodyInfo.hh>
#include <protocols/grafting/CCDEndsGraftMover.hh>
#include <protocols/grafting/simple_movers/KeepRegionMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/moves/Mover.hh>
#include <core/types.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.fwd.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/electron_density/ElectronDensity.hh>
#include <core/import_pose/import_pose.hh>
#include <protocols/electron_density/util.hh>
#include <protocols/electron_density/SetupForDensityScoringMover.hh>
#include <utility/vector1.hh>
#include <numeric/xyzVector.hh>
#include <numeric/random/random.hh>
#include <numeric/constants.hh>
#include <ObjexxFCL/string.functions.hh>
#include <core/kinematics/Jump.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/edensity.OptionKeys.gen.hh>
#include <iostream>
#include <fstream>
#include <string>

Namespaces
	protocols
	demo program for implementing loop relax + FA relax
	protocols::antibody

Functions
void	protocols::antibody::model_cdrs (core::pose::Pose &pose, AntibodyInfoCOP ab_info)
void	protocols::antibody::keep_cdr (core::pose::Pose &pose, AntibodyInfo &ab_info, CDRNameEnum cdr)
void	protocols::antibody::graft_in_cdr (core::pose::Pose &pose, AntibodyInfo &ab_info, CDRNameEnum cdr, core::pose::PoseOP template_pose)
void	protocols::antibody::copy_in_seq (core::pose::Pose &pose, AntibodyInfo &ab_info, CDRNameEnum cdr, std::string seq)
int	main (int argc, char *argv[])

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, utility::excn::Exception::display(), basic::init(), NEW_OPT, OPT, beta_nonlocal::pose, and pyrosetta.distributed.io::pose_from_file().