- e -

• edges_within_interval() : protocols::forge::methods
• effective_lower_terminus_based_on_working_res() : protocols::stepwise::modeler
• effective_upper_terminus_based_on_working_res() : protocols::stepwise::modeler
• element2name() : core::chemical::element
• element_string() : core::scoring
• element_string_dc() : core::scoring
• elements_from_name() : core::chemical::element
• ellinte() : core::scoring::rna::chemical_shift
• ellintk() : core::scoring::rna::chemical_shift
• emit_intermediate() : protocols::nonlocal , protocols::star
• EMPTY_STRING() : protocols::anchored_design
• empty_string() : protocols::viewer
• enable_constraint_scoreterms() : protocols::enzdes::enzutil
• enable_sampling_of_loop_takeoff() : protocols::stepwise::modeler::protein::loop_close
• encode_alphanum() : protocols::wum
• end_bias_probabilities() : protocols::medal
• END_BLOCK() : protocols::jd2
• energy_from_pose() : core::pose
• energy_per_residue_filter_tracer() : protocols::simple_filters
• enlarge_h_lj_wdepth() : core::chemical
• ensure_directory_for_out_silent_file_exists() : protocols::stepwise::legacy::modeler::rna
• ensure_phosphate_nomenclature_matches_mini() : protocols::farna
• ensure_valid_full_seq_num() : protocols::stepwise::modeler::rna
• entity_elements_from_1letterstring() : protocols::multistate_design
• eq_OP_deref() : protocols::genetic_algorithm
• error_check_requested_adducts() : core::chemical
• eval_atom_derivatives_for_minedge() : core::scoring
• eval_atom_derivatives_for_minnode() : core::scoring
• eval_bbbb_sr2b_energies() : core::scoring
• eval_bbsc_sr2b_energies() : core::scoring
• eval_dof_deriv_for_minnode() : core::scoring
• eval_res_onebody_energies_for_minnode() : core::scoring
• eval_res_pair_energy_for_minedge() : core::scoring
• eval_scsc_sr2b_energies() : core::scoring
• eval_weighted_atom_derivatives_for_minedge() : core::scoring
• eval_weighted_dof_deriv_for_minnode() : core::scoring
• eval_weighted_res_onebody_energies_for_minnode() : core::scoring
• eval_weighted_res_pair_energy_for_minedge() : core::scoring
• evaluate_pose() : protocols::evaluation
• evaluaterdc() : core::scoring
• expand_icoor_atom_name() : core::chemical
• exponential_deriv() : core::scoring::constraints
• export_packer_results() : protocols::farna
• extend_sequence_mapping() : protocols::loops
• extent_aa_str() : core::fragment::picking_old::vall
• extent_ss_str() : core::fragment::picking_old::vall
• extent_to_fragdata() : core::fragment::picking_old::vall
• extract_asymmetric_unit() : core::pose::symmetry
• extract_asymmetric_unit_pdb_info() : core::pose::symmetry
• extract_continuous_chunks() : protocols::loops
• extract_extra_scores() : core::io
• extract_ideal_motifs() : protocols::denovo_design::connection
• extract_int() : protocols::denovo_design
• extract_sample_weights() : protocols::loophash
• extract_scores() : core::io
• extract_secondary_structure_chunks() : protocols::loops
• extract_tag_from_pose() : core::pose
• ExtractSmallest() : protocols::toolbox