InterfaceAnalyzer.cc File Reference

Q&D protocol to run InterfaceAnalyzerMover as protocol. More...

#include <protocols/analysis/InterfaceAnalyzerMover.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/moves/Mover.hh>
#include <core/conformation/Conformation.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <devel/init.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <utility/vector1.hh>

Classes
class	IAMover

Functions
static THREAD_LOCAL basic::Tracer	TR ("apps.public.analysis.InterfaceAnalyzer")
int	main (int argc, char *argv[])

Variables
basic::options::IntegerOptionKey const	jumpnum ("jumpnum")
basic::options::BooleanOptionKey const	compute_packstat ("compute_packstat")
basic::options::BooleanOptionKey const	tracer_data_print ("tracer_data_print")
basic::options::StringVectorOptionKey const	fixedchains ("fixedchains")
basic::options::BooleanOptionKey const	pack_input ("pack_input")
basic::options::BooleanOptionKey const	pack_separated ("pack_separated")
basic::options::BooleanOptionKey const	use_jobname ("use_jobname")
basic::options::BooleanOptionKey const	add_regular_scores_to_scorefile ("add_regular_scores_to_scorefile")
basic::options::BooleanOptionKey const	use_resfile ("use_resfile")
basic::options::StringOptionKey const	interface ("interface")

Detailed Description

Q&D protocol to run InterfaceAnalyzerMover as protocol.

Author

Steven Lewis, Bryan Der, Ben Stranges

Function Documentation

int main	(	int	argc,
		char *	argv[]
	)

References add_regular_scores_to_scorefile, compute_packstat, utility::io::oc::cout, fixedchains, devel::init(), interface, jumpnum, utility::excn::EXCN_Base::msg(), basic::options::option, option, pack_input, pack_separated, TR(), tracer_data_print, use_jobname, and use_resfile.

static THREAD_LOCAL basic::Tracer TR ( "apps.public.analysis.InterfaceAnalyzer"  )

static

Referenced by IAMover::apply(), IAMover::assign_IA_mover(), and main().

Variable Documentation

basic::options::BooleanOptionKey const add_regular_scores_to_scorefile("add_regular_scores_to_scorefile")

Referenced by IAMover::apply(), and main().

basic::options::BooleanOptionKey const compute_packstat("compute_packstat")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::StringVectorOptionKey const fixedchains("fixedchains")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::StringOptionKey const interface("interface")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::IntegerOptionKey const jumpnum("jumpnum")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::BooleanOptionKey const pack_input("pack_input")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::BooleanOptionKey const pack_separated("pack_separated")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::BooleanOptionKey const tracer_data_print("tracer_data_print")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::BooleanOptionKey const use_jobname("use_jobname")

Referenced by IAMover::assign_IA_mover(), and main().

basic::options::BooleanOptionKey const use_resfile("use_resfile")

Referenced by main().