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HDmakerMover Class Reference
Inheritance diagram for HDmakerMover:
Inheritance graph
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Public Member Functions

 HDmakerMover ()
 
virtual void apply (core::pose::Pose &pose)
 
virtual std::string get_name () const
 
virtual numeric::xyzVector
< core::Real > 		find_midpoint (numeric::xyzVector< core::Real > &xpoints, numeric::xyzVector< core::Real > &ypoints)
 
virtual Real bb_score (pose::Pose &pose, core::Size aligned_chain_num, core::scoring::ScoreFunctionOP &scorefxn)
 
virtual MoverOP clone () const
 
virtual MoverOP fresh_instance () const
 

Private Attributes

core::scoring::ScoreFunctionOP scorefxn_
 
int sheet_start_
 
int sheet_stop_
 
std::string pdb_chain_
 
Real maxE_
 

Constructor & Destructor Documentation

HDmakerMover::HDmakerMover ( )

References run::chain(), E_cutoff, pyrosetta::get_score_function, option, sheet_start, and sheet_stop.

Member Function Documentation

void HDmakerMover::apply ( core::pose::Pose &  pose)
virtual

References basic::options::OptionKeys::run::chain, utility::io::oc::cout, numeric::kinematic_closure::cross(), test.T200_Scoring::hbond_set, test.T200_Scoring::ii, numeric::midpoint(), basic::options::option, option, app.surface_docking.surface_docking::pose, sheet_start, struct_file, TR(), window_size, and xyz_center_vector().

Referenced by src.protocols.jd2.RosettaScriptWrapper::apply_to_failure().

core::Real HDmakerMover::bb_score ( pose::Pose &  pose,
core::Size  aligned_chain_num,
core::scoring::ScoreFunctionOP &  scorefxn 
)
virtual

References basic::options::OptionKeys::score::analytic_etable_evaluation, numeric::distance_squared(), test.T200_Scoring::ii, basic::options::OptionKeys::frags::j, basic::options::option, app.delta_score_per_mutation::res, TR(), utility_exit_with_message, and basic::options::OptionKeys::in::file::xyz.

virtual MoverOP HDmakerMover::clone ( ) const
inlinevirtual
numeric::xyzVector< core::Real > HDmakerMover::find_midpoint ( numeric::xyzVector< core::Real > &  xpoints,
numeric::xyzVector< core::Real > &  ypoints 
)
virtual

References numeric::midpoint().

virtual MoverOP HDmakerMover::fresh_instance ( ) const
inlinevirtual

References clone().

virtual std::string HDmakerMover::get_name ( ) const
inlinevirtual

Member Data Documentation

Real HDmakerMover::maxE_
private
std::string HDmakerMover::pdb_chain_
private
core::scoring::ScoreFunctionOP HDmakerMover::scorefxn_
private
int HDmakerMover::sheet_start_
private
int HDmakerMover::sheet_stop_
private
The documentation for this class was generated from the following file:
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