- c -

• C_SVC : Svm.hh
• chain_index : exposed_strand_finder.cc

- e -

• E1_V0 : T01.enum.hpp
• E1_V1 : T01.enum.hpp
• E1A : self_test_01.hpp
• E1B : self_test_01.hpp
• E2_V0 : T01.enum.hpp
• E2_V1 : T01.enum.hpp
• end_index : exposed_strand_finder.cc
• EPSILON_SVR : Svm.hh

- f -

• fast_relax_perfbench_mmstd : FastRelax.bench.hh
• fast_relax_perfbench_sc12he : FastRelax.bench.hh
• fast_relax_perfbench_sc12sp2 : FastRelax.bench.hh
• fast_relax_perfbench_score12 : FastRelax.bench.hh
• fast_relax_perfbench_sp2hecart : FastRelax.bench.hh

- h -

• High : Docking.bench.hh

- i -

• interaction_graph_perfbench_denseig_score12 : InteractionGraph.bench.hh
• interaction_graph_perfbench_linmemig_mmstd : InteractionGraph.bench.hh
• interaction_graph_perfbench_linmemig_sc12he : InteractionGraph.bench.hh
• interaction_graph_perfbench_linmemig_sc12sp2 : InteractionGraph.bench.hh
• interaction_graph_perfbench_linmemig_score12 : InteractionGraph.bench.hh
• interaction_graph_perfbench_pdig_score12 : InteractionGraph.bench.hh

- l -

• LINEAR : Svm.hh
• Low : Docking.bench.hh

- m -

• max_neighbors : exposed_strand_finder.cc
• metal : zinc_heterodimer_design.cc

- n -

• NU_SVC : Svm.hh
• NU_SVR : Svm.hh

- o -

• ONE_CLASS : Svm.hh

- p -

• p1_1 : zinc_heterodimer_design.cc
• p1_2 : zinc_heterodimer_design.cc
• p1_3 : zinc_heterodimer_design.cc
• p2 : zinc_heterodimer_design.cc
• POLY : Svm.hh
• PRECOMPUTED : Svm.hh

- r -

• RBF : Svm.hh
• rot : homodimer_design.cc

- s -

• SFT_dfpmin : Minimizer.bench.hh
• SFT_dfpmin_armijo : Minimizer.bench.hh
• SFT_dfpmin_armijo_nonmonotone : Minimizer.bench.hh
• SIGMOID : Svm.hh
• start_index : exposed_strand_finder.cc

- t -

• trans : homodimer_design.cc