apps::pilot::HelixMover Class Reference

#include <AlignChunkMover.hh>

Inheritance diagram for apps::pilot::HelixMover:

Public Member Functions
	HelixMover (numeric::random::RandomGenerator &RG)
numeric::xyzVector< core::Real >	get_helix_center (core::pose::Pose const &pose, Size const ires)
bool	get_helix_centers (core::pose::Pose const &pose, Size const seqpos_start, Size const seqpos_stop, utility::vector1< numeric::xyzVector< core::Real > > &helix_centers)
bool	get_helix_vectors (core::pose::Pose const &pose, Size const seqpos_start, Size const seqpos_stop, utility::vector1< numeric::xyzVector< core::Real > > &helix_vectors)
void	slide_non_ideal_helix (core::pose::Pose &pose, Size const seqpos_start, Size const seqpos_stop, core::Real const distance)
void	apply (core::pose::Pose &pose)
std::string	get_name () const

Private Attributes
numeric::random::RandomGenerator &	RG_

Constructor & Destructor Documentation

HelixMover()

apps::pilot::HelixMover::HelixMover ( numeric::random::RandomGenerator &  RG )

inline

Member Function Documentation

apply()

void apps::pilot::HelixMover::apply ( core::pose::Pose &  pose )

inline

References build_jacobian::distance, apps::pilot::downstream_residues_from_jump(), and beta_nonlocal::pose.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

get_helix_center()

numeric::xyzVector<core::Real> apps::pilot::HelixMover::get_helix_center ( core::pose::Pose const &  pose, Size const  ires  )

inline

References create_a3b_hbs::i, numeric::xyzVector< T >::normalize(), and beta_nonlocal::pose.

get_helix_centers()

bool apps::pilot::HelixMover::get_helix_centers ( core::pose::Pose const &  pose, Size const  seqpos_start, Size const  seqpos_stop, utility::vector1< numeric::xyzVector< core::Real > > &  helix_centers  )

inline

References bin_torsions::counts, apps::pilot::discontinued_lower(), apps::pilot::discontinued_upper(), get_helix_center(), and beta_nonlocal::pose.

get_helix_vectors()

bool apps::pilot::HelixMover::get_helix_vectors ( core::pose::Pose const &  pose, Size const  seqpos_start, Size const  seqpos_stop, utility::vector1< numeric::xyzVector< core::Real > > &  helix_vectors  )

inline

References beta_nonlocal::pose, and loops_kic::success.

get_name()

std::string apps::pilot::HelixMover::get_name ( ) const

inline

slide_non_ideal_helix()

void apps::pilot::HelixMover::slide_non_ideal_helix ( core::pose::Pose &  pose, Size const  seqpos_start, Size const  seqpos_stop, core::Real const  distance  )

inline

References build_jacobian::distance, natoms(), beta_nonlocal::pose, and loops_kic::success.

Member Data Documentation

RG_

numeric::random::RandomGenerator& apps::pilot::HelixMover::RG_

private

---

The documentation for this class was generated from the following file:

• src/apps/pilot/yfsong/AlignChunkMover.hh