CutOutDomain.cc File Reference

#include <ctime>
#include <devel/init.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <basic/Tracer.hh>
#include <utility/excn/Exceptions.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <fstream>
#include <string>
#include <core/pose/PDBInfo.fwd.hh>
#include <core/conformation/Conformation.hh>
#include <core/import_pose/pose_stream/MetaPoseInputStream.hh>
#include <core/import_pose/pose_stream/util.hh>
#include <basic/options/keys/cutoutdomain.OptionKeys.gen.hh>

Functions
core::Size	find_nearest_res (core::pose::Pose const &source, core::pose::Pose const &target, core::Size const res, core::Size const chain)
int	main (int argc, char *argv[])

Variables
clock_t	clk1
clock_t	clk2

Function Documentation

find_nearest_res()

core::Size find_nearest_res	(	core::pose::Pose const &	source,
		core::pose::Pose const &	target,
		core::Size const	res,
		core::Size const	chain
	)

References predPRE::chain, dist(), create_a3b_hbs::i, res, basic::options::OptionKeys::hotspot::target, and TR.

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

References utility::options::OptionCollection::add_relevant(), argv, clk1, clk2, count, test.T009_Exceptions::e, end, basic::options::OptionKeys::cutoutdomain::end, utility::options::OptionKeys::options::exit, find_nearest_res(), basic::init(), gaussian-sampling::input, create_a3b_hbs::k, basic::options::option, localrmsd::output_name, beta_nonlocal::pose, basic::options::OptionKeys::in::file::s, basic::options::OptionKeys::cutoutdomain::start, basic::options::TR, and basic::options::OptionKeys::inout::dbms::user.

Variable Documentation

clk1

clock_t clk1

Referenced by main().

clk2

clock_t clk2

Referenced by main().