calibrate_pdb_via_sidechain_optimization.cc File Reference

#include <protocols/viewer/viewers.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <basic/options/option.hh>
#include <core/pack/pack_rotamers.hh>
#include <core/pack/rotamer_trials.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <devel/init.hh>
#include <basic/Tracer.hh>
#include <protocols/jobdist/Jobs.hh>
#include <protocols/jobdist/standard_mains.hh>
#include <string>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>
#include <fstream>

Functions
void *	my_main (void *)
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("pilot_apps.calibrate_pdb_via_sidechain_optimization")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, basic::init(), my_main(), NEW_OPT, and viewer_main().

my_main()

void* my_main

(

void *

)

References basic::options::OptionKeys::matdes::dock::dump_pdb, create_a3b_hbs::i, create_a3b_hbs::nres, option, options, erraser_single_res_analysis::out, out::path::path(), beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, out::prefix(), test.T500_Packing::rotamer_trials, oop_conformations::scorefxn, TR, basic::options::OptionKeys::inout::dbms::user, and utility_exit_with_message.

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("pilot_apps.calibrate_pdb_via_sidechain_optimization") ( "pilot_apps.calibrate_pdb_via_sidechain_optimization"  )

static

Referenced by my_main().