test.G200_Module_Region Namespace Reference

Variables
string	rel = "../"
	p = pose_from_file(os.path.dirname(os.path.abspath(__file__))+"/data/gui/2j88.pdb")
	reg = Region("L", 24, 42)
	mm = reg.get_movemap(p)
	loop = reg.get_loop()
	regs = Regions()
	region2 = Region("H", 24, 42)
	tf = regs.get_basic_tf(p)
	task = tf.create_task_and_apply_taskoperations(p)
	loops = regs.get_Loops_from_regions()

Variable Documentation

loop

test.G200_Module_Region.loop = reg.get_loop()

loops

test.G200_Module_Region.loops = regs.get_Loops_from_regions()

mm

test.G200_Module_Region.mm = reg.get_movemap(p)

p

test.G200_Module_Region.p = pose_from_file(os.path.dirname(os.path.abspath(__file__))+"/data/gui/2j88.pdb")

reg

test.G200_Module_Region.reg = Region("L", 24, 42)

Referenced by utility::factory::Factory< P >.create(), utility::factory::Factory< P >.fxn_registry_transfer(), utility::factory::Factory< P >.has(), and utility::factory::Factory< P >.ptr_registry_transfer().

region2

test.G200_Module_Region.region2 = Region("H", 24, 42)

Referenced by processRegions().

regs

test.G200_Module_Region.regs = Regions()

rel

string test.G200_Module_Region.rel = "../"

Referenced by protocols::antibody::design::AntibodyDesignMoverGenerator.generate_relax(), and protocols::antibody::design::AntibodyDesignMoverGenerator.setup_relax().

task

test.G200_Module_Region.task = tf.create_task_and_apply_taskoperations(p)

tf

test.G200_Module_Region.tf = regs.get_basic_tf(p)

Referenced by PeptoidRotamerRecoverer.apply(), TestMMOP.apply(), A3BHbsDockDesignMinimizeMover.apply(), B3AADihedralGrabber.apply(), TrizaolamerDockDesignMinimizeMover.apply(), LDConverterMover.apply(), HotspotPlacementMover.apply(), MinPackMinMover.apply(), calc_scores(), capri_t033_centroid_trim_dock_test(), centroid_rescore_test(), define_interface(), XMLprinterMover.fill_designable_set(), fill_designable_set(), XMLprinterMover.fill_packable_set(), protocols::antibody::design::AntibodyDesignMoverGenerator.get_dock_tf(), HemeBindingMover.HemeBindingMover(), DesignGlycansProtocol.init(), GlycomutagenesisProtocol.init(), DockGlycansProtocol.init(), main(), MSA_design(), MinPackMin.pack_sidechains(), rebuild_trimmed_loops(), relax_test(), A3BHbsCreatorMover.repack(), numeric::linear_algebra.rgg(), ConsensusFragmentMover.run(), protocols::antibody::design::AntibodyDesignMoverGenerator.set_task_factory(), abbinding.setup_RepulsiveRampMover(), SymFixbbMover.setup_task_mm(), HemeBindingMover.task_factory(), trim_dock_rebuild_relax_test(), and trim_dock_rebuild_relax_test_rhiju().