Rosetta
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#include <KDTree.hh>
Public Member Functions | |
~KDTree () override | |
Automatically generated virtual destructor for class deriving directly from VirtualBase. More... | |
KDTree () | |
Empty constructor. More... | |
KDTree (utility::vector1< utility::vector1< numeric::Real > > &pts) | |
Constructs a balanced kd-tree from the set of k-dimensional input points. More... | |
KDTree (utility::vector1< utility::vector1< numeric::Real > > &pts, utility::vector1< utility::VirtualBaseOP > &data) | |
numeric::Size | size () const |
Number of points in the kd-tree. More... | |
numeric::Size | ndim () const |
Number of dimensions in the kd-tree. This is the "k" in kd. More... | |
KDNodeOP | root () const |
Returns the KDNodeOP that is the root of the balanced kd-tree. More... | |
HyperRectangleOP | bounds () const |
Returns the HyperRectangle that bounds all of the points in the kd-tree. More... | |
void | size (numeric::Size new_size) |
Sets the number of points in this kd-tree. More... | |
void | root (KDNodeOP new_root) |
Sets the root of the kd-tree. More... | |
void | extend_bounds (utility::vector1< numeric::Real > const &pt) |
Pushes out the bounds of the HyperRectangle bounding this kd-tree if necessary. More... | |
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VirtualBase ()=default | |
Default constructor. More... | |
virtual | ~VirtualBase ()=default |
The virtual destructor is one of the main reasons for the VirtualBase class. More... | |
VirtualBase (VirtualBase const &)=default | |
VirtualBase (VirtualBase &&)=default | |
VirtualBase & | operator= (VirtualBase const &)=default |
VirtualBase & | operator= (VirtualBase &&)=default |
Private Attributes | |
numeric::Size | size_ |
KDNodeOP | root_ |
HyperRectangleOP | bounds_ |
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overridedefault |
Automatically generated virtual destructor for class deriving directly from VirtualBase.
Auto-generated virtual destructor
numeric::kdtree::KDTree::KDTree | ( | ) |
Empty constructor.
numeric::kdtree::KDTree::KDTree | ( | utility::vector1< utility::vector1< numeric::Real > > & | pts | ) |
Constructs a balanced kd-tree from the set of k-dimensional input points.
References bounds_, numeric::kdtree::construct_kd_tree(), numeric::kdtree::make_points(), add_xyz_to_pose::pts, root_, and size().
numeric::kdtree::KDTree::KDTree | ( | utility::vector1< utility::vector1< numeric::Real > > & | pts, |
utility::vector1< utility::VirtualBaseOP > & | data | ||
) |
References bounds_, numeric::kdtree::construct_kd_tree(), data, numeric::kdtree::make_points(), add_xyz_to_pose::pts, root_, and size().
HyperRectangleOP numeric::kdtree::KDTree::bounds | ( | ) | const |
Returns the HyperRectangle that bounds all of the points in the kd-tree.
A HyperRectangle is defined as two vectors upper and lower, with each dimension of lower having the minimum value seen in each dimension, and each dimension of higher having the maximum value seen in each dimension.
References bounds_.
Referenced by numeric::kdtree::nearest_neighbor(), and numeric::kdtree::nearest_neighbors().
void numeric::kdtree::KDTree::extend_bounds | ( | utility::vector1< numeric::Real > const & | pt | ) |
Pushes out the bounds of the HyperRectangle bounding this kd-tree if necessary.
References bounds_.
numeric::Size numeric::kdtree::KDTree::ndim | ( | ) | const |
Number of dimensions in the kd-tree. This is the "k" in kd.
References bounds_.
KDNodeOP numeric::kdtree::KDTree::root | ( | ) | const |
Returns the KDNodeOP that is the root of the balanced kd-tree.
References root_.
Referenced by numeric::kdtree::nearest_neighbor(), and numeric::kdtree::nearest_neighbors().
void numeric::kdtree::KDTree::root | ( | KDNodeOP | new_root | ) |
Sets the root of the kd-tree.
References root_.
numeric::Size numeric::kdtree::KDTree::size | ( | ) | const |
void numeric::kdtree::KDTree::size | ( | numeric::Size | new_size | ) |
Sets the number of points in this kd-tree.
References size_.
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private |
Referenced by bounds(), extend_bounds(), KDTree(), and ndim().
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private |
Referenced by size().