pyrosetta.distributed.viewer.modules Namespace Reference

Classes
class	setBackgroundColor
class	setDisulfides
class	setHydrogenBonds
class	setHydrogens
class	setStyle
class	setSurface
class	setZoom
class	setZoomTo
class	ViewerInputError

Functions
def	_pose_to_residue_chain_tuples (pose, residue_selector, logger=_logger)
def	_pdbstring_to_pose (pdbstring, class_name, logger=_logger)

Variables
string	__author__ = "Jason C. Klima"
	_logger = logging.getLogger("pyrosetta.distributed.viewer")

Function Documentation

_pdbstring_to_pose()

def pyrosetta.distributed.viewer.modules._pdbstring_to_pose (   pdbstring,   class_name,   logger = _logger  )

private

Convert pdbstring to a `Pose` with logging.

References pyrosetta.tests.distributed.test_dask.format, join(), and binder.split().

Referenced by pyrosetta.distributed.viewer.modules.setDisulfides.apply(), pyrosetta.distributed.viewer.modules.setHydrogenBonds.apply(), pyrosetta.distributed.viewer.modules.setHydrogens.apply(), pyrosetta.distributed.viewer.modules.setStyle.apply(), pyrosetta.distributed.viewer.modules.setSurface.apply(), and pyrosetta.distributed.viewer.modules.setZoomTo.apply().

_pose_to_residue_chain_tuples()

def pyrosetta.distributed.viewer.modules._pose_to_residue_chain_tuples (   pose,   residue_selector,   logger = _logger  )

private

Given a `Pose` object and `ResidueSelector` object, return a `tuple` of `list`s containing
PDB residue numbers and chain IDs for the selection.

References pyrosetta.tests.distributed.test_dask.format, ObjexxFCL.len(), basic::options::OptionKeys::in::file.list, and basic::options::OptionKeys::in::file.zip.

Referenced by pyrosetta.distributed.viewer.modules.setStyle.apply(), pyrosetta.distributed.viewer.modules.setSurface.apply(), and pyrosetta.distributed.viewer.modules.setZoomTo.apply().

Variable Documentation

__author__

string pyrosetta.distributed.viewer.modules.__author__ = "Jason C. Klima"

private

_logger

pyrosetta.distributed.viewer.modules._logger = logging.getLogger("pyrosetta.distributed.viewer")

private