Rosetta
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Public Member Functions | |
def | __init__ (self, name=None, ctype=None, group=None, desc="No description", short="", oldName="-", lower=None, upper=None, default=None, legal=None, n=None, n_lower=None, n_upper=None, restrict_access=False) |
def | get_namespace (self, level) |
def | getCName (self) |
def | getOptionCC (self) |
def | getOptionKeysHH (self) |
def | getOptionKeysCC (self) |
def | getWikiTableRow (self) |
def | getDoxygenRow (self) |
def | getMarkdownRow (self) |
Public Attributes | |
ctype | |
name | |
group | |
desc | |
short | |
oldName | |
lower | |
upper | |
default | |
legal | |
restrict_access | |
n | |
n_lower | |
n_upper | |
is_option_group | |
def options_class.Option.__init__ | ( | self, | |
name = None , |
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ctype = None , |
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group = None , |
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desc = "No description" , |
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short = "" , |
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oldName = "-" , |
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lower = None , |
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upper = None , |
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default = None , |
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legal = None , |
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n = None , |
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n_lower = None , |
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n_upper = None , |
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restrict_access = False |
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) |
References print().
Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().
def options_class.Option.get_namespace | ( | self, | |
level | |||
) |
References options_class.Option.group, ObjexxFCL.len(), and binder.split().
def options_class.Option.getCName | ( | self | ) |
References PerformanceBenchmark.name(), enumerate_junctions.DHR.name, pointGroupHit.name(), Arch.name(), basic::database::schema_generator::Column.name(), options_class.Option.name, basic::sampling::orientations::QuatDBMetadata.name, numeric::expression_parser::VariableToken.name(), numeric::expression_parser::FunctionToken.name(), numeric::expression_parser::VariableExpression.name(), numeric::Polynomial_1d.name(), detail::named_arg< Char, T >.name, detail::named_arg_info< Char >.name, detail::named_arg_info< char_type >.name, detail::arg_ref< Char >::value.name, pyrosetta.distributed.docs.ComponentDoc.name, ui::network::BowmanModel::FunctionIdentifier.name, ui::network::FunctionID.name, ui::network::Bowman::BackEnd.name, ui::task::PNode.name, ui::task::File.name(), ui::task::FileTableModel::Row.name, ui::task::Functor.name(), ui::task::Task.name(), utility::file::FileName.name(), utility::file::PathName.name(), utility::options::VariantOption< O >.name(), basic::tensorflow_manager::RosettaTensorflowProtocolBase.name(), ui::task::ProjectTasksModel::Row.name, ui::task::Task::Job.name, utility::options::Option.name(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.name(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.name(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.name(), utility::options::ScalarOption_T_< AnyOptionKey, T >.name(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.name(), utility::options::ScalarOption_T_< RealOptionKey, double >.name(), utility::options::ScalarOption_T_< K, T >.name(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.name(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.name(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.name(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.name(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.name(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.name(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.name(), utility::options::VectorOption_T_< K, T >.name(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.name(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.name(), schema.Job.name(), utility::io::TarFileHeader.name, utility::tag::tag_grammar::definition< Scanner >.name, utility::tag::XMLSchemaAttribute.name(), utility::tag::XMLSchemaRestriction.name(), utility::tag::XMLSchemaComplexType.name(), utility::tag::XMLSchemaElement.name(), and str().
Referenced by options_class.Option.getOptionCC(), options_class.Option.getOptionKeysCC(), and options_class.Option.getOptionKeysHH().
def options_class.Option.getDoxygenRow | ( | self | ) |
References options_class.Option.ctype, job_manager.CommandLauncher.default, job_manager.TorsionVsTime.default, job_manager.CorrelationTime.default, options_class.Option.default, options_class.Option.desc, format_arg_store< Context, Args >.desc, options_class.Option.legal, ObjexxFCL::IndexRange.legal(), utility::options::Option.legal(), ObjexxFCL::DynamicIndexRange.legal(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.legal(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.legal(), utility::options::ScalarOption_T_< AnyOptionKey, T >.legal(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.legal(), utility::options::ScalarOption_T_< K, T >.legal(), utility::options::ScalarOption_T_< RealOptionKey, double >.legal(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.legal(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.legal(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.legal(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.legal(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.legal(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.legal(), utility::options::VectorOption_T_< K, T >.legal(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.legal(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.legal(), options_class.Option.lower, numeric::geometry::BoundingBox< Vector >.lower(), numeric::geometry::BoundingBox< T >.lower(), numeric::geometry::BoundingBox< xyzVector< Real > >.lower(), numeric::kdtree::HyperRectangle.lower(), detail::boundaries.lower, detail::accumulator.lower, utility::options::ScalarOption_T_< AnyOptionKey, T >.lower(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.lower(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.lower(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.lower(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.lower(), utility::options::ScalarOption_T_< K, T >.lower(), utility::options::ScalarOption_T_< RealOptionKey, double >.lower(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.lower(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.lower(), utility::options::VectorOption_T_< K, T >.lower(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.lower(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.lower(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.lower(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.lower(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.lower(), PerformanceBenchmark.name(), enumerate_junctions.DHR.name, pointGroupHit.name(), Arch.name(), basic::database::schema_generator::Column.name(), options_class.Option.name, basic::sampling::orientations::QuatDBMetadata.name, numeric::expression_parser::VariableToken.name(), numeric::expression_parser::FunctionToken.name(), numeric::expression_parser::VariableExpression.name(), numeric::Polynomial_1d.name(), basic::tensorflow_manager::RosettaTensorflowProtocolBase.name(), detail::named_arg< Char, T >.name, detail::named_arg_info< Char >.name, detail::named_arg_info< char_type >.name, detail::arg_ref< Char >::value.name, pyrosetta.distributed.docs.ComponentDoc.name, ui::network::BowmanModel::FunctionIdentifier.name, ui::network::FunctionID.name, ui::network::Bowman::BackEnd.name, ui::task::PNode.name, ui::task::File.name(), ui::task::FileTableModel::Row.name, ui::task::Functor.name(), ui::task::ProjectTasksModel::Row.name, ui::task::Task::Job.name, ui::task::Task.name(), utility::file::FileName.name(), utility::file::PathName.name(), utility::options::VariantOption< O >.name(), utility::options::Option.name(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.name(), utility::options::ScalarOption_T_< RealOptionKey, double >.name(), utility::options::ScalarOption_T_< K, T >.name(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.name(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.name(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.name(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.name(), utility::options::ScalarOption_T_< AnyOptionKey, T >.name(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.name(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.name(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.name(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.name(), utility::options::VectorOption_T_< K, T >.name(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.name(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.name(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.name(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.name(), schema.Job.name(), utility::tag::tag_grammar::definition< Scanner >.name, utility::tag::XMLSchemaAttribute.name(), utility::tag::XMLSchemaRestriction.name(), utility::tag::XMLSchemaComplexType.name(), utility::tag::XMLSchemaElement.name(), utility::io::TarFileHeader.name, str(), options_class.Option.upper, numeric::geometry::BoundingBox< T >.upper(), numeric::geometry::BoundingBox< xyzVector< Real > >.upper(), numeric::geometry::BoundingBox< Vector >.upper(), numeric::kdtree::HyperRectangle.upper(), detail::boundaries.upper, detail::accumulator.upper, detail::float_specs.upper, utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.upper(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.upper(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.upper(), utility::options::ScalarOption_T_< K, T >.upper(), utility::options::ScalarOption_T_< AnyOptionKey, T >.upper(), utility::options::ScalarOption_T_< RealOptionKey, double >.upper(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.upper(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.upper(), utility::options::VectorOption_T_< K, T >.upper(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.upper(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.upper(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.upper(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.upper(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.upper(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.upper(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.upper(), and utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.upper().
def options_class.Option.getMarkdownRow | ( | self | ) |
References options_class.Option.ctype, job_manager.CommandLauncher.default, job_manager.TorsionVsTime.default, job_manager.CorrelationTime.default, options_class.Option.default, options_class.Option.desc, format_arg_store< Context, Args >.desc, options_class.Option.legal, ObjexxFCL::IndexRange.legal(), utility::options::Option.legal(), ObjexxFCL::DynamicIndexRange.legal(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.legal(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.legal(), utility::options::ScalarOption_T_< AnyOptionKey, T >.legal(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.legal(), utility::options::ScalarOption_T_< K, T >.legal(), utility::options::ScalarOption_T_< RealOptionKey, double >.legal(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.legal(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.legal(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.legal(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.legal(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.legal(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.legal(), utility::options::VectorOption_T_< K, T >.legal(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.legal(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.legal(), options_class.Option.lower, numeric::geometry::BoundingBox< Vector >.lower(), numeric::geometry::BoundingBox< T >.lower(), numeric::geometry::BoundingBox< xyzVector< Real > >.lower(), numeric::kdtree::HyperRectangle.lower(), detail::boundaries.lower, detail::accumulator.lower, utility::options::ScalarOption_T_< AnyOptionKey, T >.lower(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.lower(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.lower(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.lower(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.lower(), utility::options::ScalarOption_T_< K, T >.lower(), utility::options::ScalarOption_T_< RealOptionKey, double >.lower(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.lower(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.lower(), utility::options::VectorOption_T_< K, T >.lower(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.lower(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.lower(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.lower(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.lower(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.lower(), PerformanceBenchmark.name(), enumerate_junctions.DHR.name, pointGroupHit.name(), Arch.name(), basic::database::schema_generator::Column.name(), options_class.Option.name, basic::sampling::orientations::QuatDBMetadata.name, numeric::expression_parser::VariableToken.name(), numeric::expression_parser::FunctionToken.name(), numeric::expression_parser::VariableExpression.name(), numeric::Polynomial_1d.name(), basic::tensorflow_manager::RosettaTensorflowProtocolBase.name(), detail::named_arg< Char, T >.name, detail::named_arg_info< Char >.name, detail::named_arg_info< char_type >.name, detail::arg_ref< Char >::value.name, pyrosetta.distributed.docs.ComponentDoc.name, ui::network::BowmanModel::FunctionIdentifier.name, ui::network::FunctionID.name, ui::network::Bowman::BackEnd.name, ui::task::PNode.name, ui::task::File.name(), ui::task::FileTableModel::Row.name, ui::task::Functor.name(), ui::task::ProjectTasksModel::Row.name, ui::task::Task::Job.name, ui::task::Task.name(), utility::file::FileName.name(), utility::file::PathName.name(), utility::options::VariantOption< O >.name(), utility::options::Option.name(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.name(), utility::options::ScalarOption_T_< RealOptionKey, double >.name(), utility::options::ScalarOption_T_< K, T >.name(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.name(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.name(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.name(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.name(), utility::options::ScalarOption_T_< AnyOptionKey, T >.name(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.name(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.name(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.name(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.name(), utility::options::VectorOption_T_< K, T >.name(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.name(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.name(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.name(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.name(), schema.Job.name(), utility::tag::tag_grammar::definition< Scanner >.name, utility::tag::XMLSchemaAttribute.name(), utility::tag::XMLSchemaRestriction.name(), utility::tag::XMLSchemaComplexType.name(), utility::tag::XMLSchemaElement.name(), utility::io::TarFileHeader.name, str(), options_class.Option.upper, numeric::geometry::BoundingBox< T >.upper(), numeric::geometry::BoundingBox< xyzVector< Real > >.upper(), numeric::geometry::BoundingBox< Vector >.upper(), numeric::kdtree::HyperRectangle.upper(), detail::boundaries.upper, detail::accumulator.upper, detail::float_specs.upper, utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.upper(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.upper(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.upper(), utility::options::ScalarOption_T_< K, T >.upper(), utility::options::ScalarOption_T_< AnyOptionKey, T >.upper(), utility::options::ScalarOption_T_< RealOptionKey, double >.upper(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.upper(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.upper(), utility::options::VectorOption_T_< K, T >.upper(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.upper(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.upper(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.upper(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.upper(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.upper(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.upper(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.upper(), and utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.upper().
def options_class.Option.getOptionCC | ( | self | ) |
References job_manager.CommandLauncher.default, job_manager.TorsionVsTime.default, job_manager.CorrelationTime.default, options_class.Option.default, options_class.Option.desc, format_arg_store< Context, Args >.desc, options_class.Option.getCName(), options_class.Option.group, options_class.Option.is_option_group, options_class.Option.legal, ObjexxFCL::IndexRange.legal(), utility::options::Option.legal(), ObjexxFCL::DynamicIndexRange.legal(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.legal(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.legal(), utility::options::ScalarOption_T_< K, T >.legal(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.legal(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.legal(), utility::options::ScalarOption_T_< AnyOptionKey, T >.legal(), utility::options::ScalarOption_T_< RealOptionKey, double >.legal(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.legal(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.legal(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.legal(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.legal(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.legal(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.legal(), utility::options::VectorOption_T_< K, T >.legal(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.legal(), ObjexxFCL.len(), options_class.Option.lower, numeric::geometry::BoundingBox< Vector >.lower(), numeric::geometry::BoundingBox< T >.lower(), numeric::geometry::BoundingBox< xyzVector< Real > >.lower(), numeric::kdtree::HyperRectangle.lower(), detail::boundaries.lower, detail::accumulator.lower, utility::options::ScalarOption_T_< RealOptionKey, double >.lower(), utility::options::ScalarOption_T_< AnyOptionKey, T >.lower(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.lower(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.lower(), utility::options::ScalarOption_T_< K, T >.lower(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.lower(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.lower(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.lower(), utility::options::VectorOption_T_< K, T >.lower(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.lower(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.lower(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.lower(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.lower(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.lower(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.lower(), options_class.Option.n, numeric::xyzTransform< T >::Plane.n, numeric::xyzTransform< core::Real >::Plane.n, numeric::xyzTransform< double >::Plane.n, utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.n(), utility::options::VectorOption_T_< K, T >.n(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.n(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.n(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.n(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.n(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.n(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.n(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.n(), utility::options::VectorOption.n(), options_class.Option.n_lower, utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.n_lower(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.n_lower(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.n_lower(), utility::options::VectorOption_T_< K, T >.n_lower(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.n_lower(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.n_lower(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.n_lower(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.n_lower(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.n_lower(), utility::options::VectorOption.n_lower(), options_class.Option.n_upper, utility::options::VectorOption_T_< RealVectorOptionKey, double >.n_upper(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.n_upper(), utility::options::VectorOption_T_< K, T >.n_upper(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.n_upper(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.n_upper(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.n_upper(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.n_upper(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.n_upper(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.n_upper(), utility::options::VectorOption.n_upper(), binder.replace(), options_class.Option.restrict_access, utility::options::Option.restrict_access(), options_class.Option.short, options_class.Option.upper, numeric::geometry::BoundingBox< Vector >.upper(), numeric::geometry::BoundingBox< xyzVector< Real > >.upper(), numeric::geometry::BoundingBox< T >.upper(), numeric::kdtree::HyperRectangle.upper(), detail::boundaries.upper, detail::accumulator.upper, detail::float_specs.upper, utility::options::ScalarOption_T_< AnyOptionKey, T >.upper(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.upper(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.upper(), utility::options::ScalarOption_T_< RealOptionKey, double >.upper(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.upper(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.upper(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.upper(), utility::options::ScalarOption_T_< K, T >.upper(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.upper(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.upper(), utility::options::VectorOption_T_< K, T >.upper(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.upper(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.upper(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.upper(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.upper(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.upper(), and utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.upper().
def options_class.Option.getOptionKeysCC | ( | self | ) |
References options_class.Option.ctype, options_class.Option.getCName(), options_class.Option.group, PerformanceBenchmark.name(), enumerate_junctions.DHR.name, pointGroupHit.name(), Arch.name(), basic::database::schema_generator::Column.name(), options_class.Option.name, basic::sampling::orientations::QuatDBMetadata.name, numeric::expression_parser::VariableToken.name(), numeric::expression_parser::FunctionToken.name(), numeric::expression_parser::VariableExpression.name(), numeric::Polynomial_1d.name(), basic::tensorflow_manager::RosettaTensorflowProtocolBase.name(), detail::named_arg< Char, T >.name, detail::named_arg_info< Char >.name, detail::named_arg_info< char_type >.name, detail::arg_ref< Char >::value.name, pyrosetta.distributed.docs.ComponentDoc.name, ui::network::BowmanModel::FunctionIdentifier.name, ui::network::FunctionID.name, ui::network::Bowman::BackEnd.name, ui::task::PNode.name, ui::task::File.name(), ui::task::FileTableModel::Row.name, ui::task::Functor.name(), ui::task::ProjectTasksModel::Row.name, ui::task::Task::Job.name, ui::task::Task.name(), utility::file::FileName.name(), utility::file::PathName.name(), utility::options::VariantOption< O >.name(), utility::options::Option.name(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.name(), utility::options::ScalarOption_T_< K, T >.name(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.name(), utility::options::ScalarOption_T_< AnyOptionKey, T >.name(), utility::options::ScalarOption_T_< RealOptionKey, double >.name(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.name(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.name(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.name(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.name(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.name(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.name(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.name(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.name(), utility::options::VectorOption_T_< K, T >.name(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.name(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.name(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.name(), schema.Job.name(), utility::io::TarFileHeader.name, utility::tag::tag_grammar::definition< Scanner >.name, utility::tag::XMLSchemaAttribute.name(), utility::tag::XMLSchemaRestriction.name(), utility::tag::XMLSchemaComplexType.name(), utility::tag::XMLSchemaElement.name(), and binder.split().
def options_class.Option.getOptionKeysHH | ( | self | ) |
def options_class.Option.getWikiTableRow | ( | self | ) |
References options_class.Option.ctype, job_manager.CommandLauncher.default, job_manager.TorsionVsTime.default, job_manager.CorrelationTime.default, options_class.Option.default, options_class.Option.desc, format_arg_store< Context, Args >.desc, options_class.Option.legal, ObjexxFCL::IndexRange.legal(), utility::options::Option.legal(), ObjexxFCL::DynamicIndexRange.legal(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.legal(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.legal(), utility::options::ScalarOption_T_< AnyOptionKey, T >.legal(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.legal(), utility::options::ScalarOption_T_< K, T >.legal(), utility::options::ScalarOption_T_< RealOptionKey, double >.legal(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.legal(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.legal(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.legal(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.legal(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.legal(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.legal(), utility::options::VectorOption_T_< K, T >.legal(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.legal(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.legal(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.legal(), options_class.Option.lower, numeric::geometry::BoundingBox< xyzVector< Real > >.lower(), numeric::geometry::BoundingBox< Vector >.lower(), numeric::geometry::BoundingBox< T >.lower(), numeric::kdtree::HyperRectangle.lower(), detail::boundaries.lower, detail::accumulator.lower, utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.lower(), utility::options::ScalarOption_T_< AnyOptionKey, T >.lower(), utility::options::ScalarOption_T_< K, T >.lower(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.lower(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.lower(), utility::options::ScalarOption_T_< RealOptionKey, double >.lower(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.lower(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.lower(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.lower(), utility::options::VectorOption_T_< K, T >.lower(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.lower(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.lower(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.lower(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.lower(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.lower(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.lower(), PerformanceBenchmark.name(), enumerate_junctions.DHR.name, pointGroupHit.name(), Arch.name(), basic::database::schema_generator::Column.name(), options_class.Option.name, basic::sampling::orientations::QuatDBMetadata.name, numeric::expression_parser::VariableToken.name(), numeric::expression_parser::FunctionToken.name(), numeric::expression_parser::VariableExpression.name(), numeric::Polynomial_1d.name(), basic::tensorflow_manager::RosettaTensorflowProtocolBase.name(), detail::named_arg< Char, T >.name, detail::named_arg_info< Char >.name, detail::named_arg_info< char_type >.name, detail::arg_ref< Char >::value.name, pyrosetta.distributed.docs.ComponentDoc.name, ui::network::BowmanModel::FunctionIdentifier.name, ui::network::FunctionID.name, ui::network::Bowman::BackEnd.name, ui::task::PNode.name, ui::task::File.name(), ui::task::FileTableModel::Row.name, ui::task::Functor.name(), ui::task::ProjectTasksModel::Row.name, ui::task::Task::Job.name, ui::task::Task.name(), utility::file::FileName.name(), utility::file::PathName.name(), utility::options::VariantOption< O >.name(), utility::options::Option.name(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.name(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.name(), utility::options::ScalarOption_T_< RealOptionKey, double >.name(), utility::options::ScalarOption_T_< K, T >.name(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.name(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.name(), utility::options::ScalarOption_T_< AnyOptionKey, T >.name(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.name(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.name(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.name(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.name(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.name(), utility::options::VectorOption_T_< K, T >.name(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.name(), utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.name(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.name(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.name(), schema.Job.name(), utility::tag::tag_grammar::definition< Scanner >.name, utility::tag::XMLSchemaAttribute.name(), utility::tag::XMLSchemaRestriction.name(), utility::tag::XMLSchemaComplexType.name(), utility::tag::XMLSchemaElement.name(), utility::io::TarFileHeader.name, options_class.Option.oldName, str(), options_class.Option.upper, numeric::geometry::BoundingBox< xyzVector< Real > >.upper(), numeric::geometry::BoundingBox< T >.upper(), numeric::geometry::BoundingBox< Vector >.upper(), numeric::kdtree::HyperRectangle.upper(), detail::boundaries.upper, detail::accumulator.upper, detail::float_specs.upper, utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.upper(), utility::options::ScalarOption_T_< BooleanOptionKey, bool >.upper(), utility::options::ScalarOption_T_< StringOptionKey, std::string >.upper(), utility::options::ScalarOption_T_< FileOptionKey, file::FileName >.upper(), utility::options::ScalarOption_T_< K, T >.upper(), utility::options::ScalarOption_T_< AnyOptionKey, T >.upper(), utility::options::ScalarOption_T_< RealOptionKey, double >.upper(), utility::options::ScalarOption_T_< IntegerOptionKey, int >.upper(), utility::options::VectorOption_T_< K, T >.upper(), utility::options::VectorOption_T_< FileVectorOptionKey, file::FileName >.upper(), utility::options::VectorOption_T_< ResidueChainVectorOptionKey, int >.upper(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.upper(), utility::options::VectorOption_T_< AnyVectorOptionKey, T >.upper(), utility::options::VectorOption_T_< StringVectorOptionKey, std::string >.upper(), utility::options::VectorOption_T_< RealVectorOptionKey, double >.upper(), utility::options::VectorOption_T_< IntegerVectorOptionKey, int >.upper(), and utility::options::VectorOption_T_< PathVectorOptionKey, file::PathName >.upper().
options_class.Option.ctype |
options_class.Option.default |
options_class.Option.desc |
options_class.Option.group |
options_class.Option.is_option_group |
Referenced by options_class.Option.getOptionCC().
options_class.Option.legal |
options_class.Option.lower |
options_class.Option.n |
Referenced by options_class.Option.getOptionCC().
options_class.Option.n_lower |
Referenced by options_class.Option.getOptionCC().
options_class.Option.n_upper |
Referenced by options_class.Option.getOptionCC().
options_class.Option.name |
Referenced by pyrosetta.distributed.docs.ComponentDoc.__repr__(), options_class.Option.getCName(), options_class.Option.getDoxygenRow(), options_class.Option.getMarkdownRow(), options_class.Option.getOptionKeysCC(), options_class.Option.getWikiTableRow(), enumerate_junctions.DHR.print(), enumerate_junctions.DHR.to_component(), and enumerate_junctions.DHR.write_to_file().
options_class.Option.oldName |
Referenced by options_class.Option.getWikiTableRow().
options_class.Option.restrict_access |
Referenced by options_class.Option.getOptionCC().
options_class.Option.short |
Referenced by options_class.Option.getOptionCC().
options_class.Option.upper |