concatenates poses together end-to-end while transforming them to avoid chainbreaks More...

#include <apps/pilot/frankdt/steric_fusion_scan.hh>
#include <basic/Tracer.hh>
#include <devel/init.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/ChemicalManager.hh>
#include <algorithm>
#include <regex>
#include <boost/algorithm/string.hpp>
#include <basic/options/option.hh>
#include <basic/options/keys/sewing.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/inout.OptionKeys.gen.hh>
#include <utility/io/ozstream.hh>
#include <utility/io/izstream.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/conformation/Residue.hh>
#include <core/import_pose/import_pose.hh>
#include <iostream>
#include <string>
#include <stdlib.h>
#include <core/conformation/Atom.hh>
#include <numeric/random/random.hh>
#include <numeric/HomogeneousTransform.hh>

Namespaces
	apps

	apps::pilot

	apps::pilot::frankdt

Functions
int	apps::pilot::frankdt::main (int argc, char *argv[])

int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot.frankdt.steric_fusion_scan")

FileOptionKey const	n_terminal_component_list ("n_terminal_component_list")

FileOptionKey const	c_terminal_component_list ("c_terminal_component_list")

FileOptionKey const	exclude_component_file_name ("exclude_component_file_name")

FileOptionKey const	output_filename ("output_file_name")

FileOptionKey const	n_terminal_range ("n_terminal_range")

FileOptionKey const	c_terminal_range ("c_terminal_range")

Detailed Description

concatenates poses together end-to-end while transforming them to avoid chainbreaks

Author: frankdt (frank.nosp@m.dt@e.nosp@m.mail..nosp@m.unc..nosp@m.edu)

Function Documentation

◆ main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, and apps::pilot::frankdt::main().

Variable Documentation

◆ c_terminal_component_list

FileOptionKey const c_terminal_component_list("c_terminal_component_list") ( "c_terminal_component_list" )

◆ c_terminal_range

FileOptionKey const c_terminal_range("c_terminal_range") ( "c_terminal_range" )

◆ exclude_component_file_name

FileOptionKey const exclude_component_file_name("exclude_component_file_name") ( "exclude_component_file_name" )

◆ n_terminal_component_list

FileOptionKey const n_terminal_component_list("n_terminal_component_list") ( "n_terminal_component_list" )

◆ n_terminal_range

FileOptionKey const n_terminal_range("n_terminal_range") ( "n_terminal_range" )

◆ output_filename

FileOptionKey const output_filename("output_file_name") ( "output_file_name" )

◆ TR

basic::Tracer TR("apps.pilot.frankdt.steric_fusion_scan") ( "apps.pilot.frankdt.steric_fusion_scan" )

static

Namespaces

Functions

Variables