cal_NBR_radius Namespace Reference

Functions
def	parse_res_lines (lines, nres)

Variables
	argv = sys.argv
	inputfiles = argv[1:]
dictionary	masslst = {'C':12.0107, 'O':15.9994, 'N':14.00674, 'S':32.066, 'H':1.00794}
	inp = open(inputfile,'r')
	lines = inp.readlines()
int	current_res = 1
list	reslines = []
	res_num = int(line[22:26])

Function Documentation

parse_res_lines()

def cal_NBR_radius.parse_res_lines	(		lines,
			nres
	)

References run_backbone.float, ObjexxFCL.len(), max(), and ObjexxFCL.strip().

Variable Documentation

argv

cal_NBR_radius.argv = sys.argv

current_res

cal_NBR_radius.current_res = 1

Referenced by HemeBindingMover.add_initial_constraints(), and ExposedStrandMover.apply().

inp

cal_NBR_radius.inp = open(inputfile,'r')

inputfiles

cal_NBR_radius.inputfiles = argv[1:]

lines

cal_NBR_radius.lines = inp.readlines()

masslst

dictionary cal_NBR_radius.masslst = {'C':12.0107, 'O':15.9994, 'N':14.00674, 'S':32.066, 'H':1.00794}

res_num

cal_NBR_radius.res_num = int(line[22:26])

Referenced by figure_out_icoord_test(), main(), output_score(), SimulateCryoMover.pose_to_xyz(), SimulateCryoMover.recenter_pose_at_origin(), sample_torsions(), SimulateCryoMover.set_bfactors(), SimulateCryoMover.set_extent(), and setup_rna_minimizer().

reslines

list cal_NBR_radius.reslines = []