Rosetta
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#include <devel/init.hh>
#include <core/chemical/ChemicalManager.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <protocols/moves/Mover.hh>
#include <utility/pointer/owning_ptr.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <basic/options/option.hh>
#include <numeric/random/random.hh>
#include <core/scoring/etable/Etable.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/Ramachandran.hh>
#include <core/pack/dunbrack/RotamerLibrary.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/id/AtomID_Map.hh>
#include <core/optimization/AtomTreeMinimizer.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <core/pose/Pose.hh>
#include <basic/database/open.hh>
#include <core/io/pdb/build_pose_as_is.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/import_pose/import_pose.hh>
#include <core/pose/annotated_sequence.hh>
#include <ostream>
#include <fstream>
#include <iostream>
#include <basic/options/keys/james.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <utility/exit.hh>
Classes | |
class | OutputMover |
class | AA |
Typedefs | |
typedef utility::pointer::owning_ptr< OutputMover > | OutputMoverOP |
typedef utility::pointer::owning_ptr< OutputMover const > | OutputMoverCOP |
Functions | |
void | TracerDiskSpaceTest (void) |
void | show (std::ostream &tr) |
std::ostream & | operator<< (std::ostream &tr, AA) |
void | test_Tracer () |
void | test_Random (void) |
int | main (int argc, char *argv[]) |
Variables | |
static basic::Tracer | TM ("TMemory") |
static basic::Tracer | TR_ ("global") |
typedef utility::pointer::owning_ptr< OutputMover const > OutputMoverCOP |
typedef utility::pointer::owning_ptr< OutputMover > OutputMoverOP |
int main | ( | int | argc, |
char * | argv[] | ||
) |
References utility::options::OptionCollection::add_relevant(), argv, utility::io::oc::cerr, utility::io::oc::cout, in::path::database(), test.T009_Exceptions::e, basic::init(), basic::options::option, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, oop_conformations::scorefxn, basic::options::OptionKeys::relax::sequence, pyrosetta.distributed.cluster.exceptions::T, test_Tracer(), TR, and utility_exit_with_message.
void show | ( | std::ostream & | tr | ) |
References tr.
Referenced by test_Tracer().
void test_Random | ( | void | ) |
void test_Tracer | ( | ) |
References a, basic::Tracer::Debug, basic::Tracer::Error, basic::Tracer::Fatal, basic::Tracer::Info, show(), TR, TR2, basic::Tracer::Trace, and basic::Tracer::Warning.
Referenced by main().
void TracerDiskSpaceTest | ( | void | ) |
References create_a3b_hbs::i, and TM.
Referenced by OutputMover::apply().
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static |
Referenced by TracerDiskSpaceTest().
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static |
Referenced by test_Random().