FunGroupTK Class Reference

Inheritance diagram for FunGroupTK:

Public Member Functions
	FunGroupTK (Pose p_in, vector1< Size > &pos)
ImplicitFastClashCheck const &	ifc () const
virtual void	place_n (Vec const &cen0, Vec const &axs0, Vec const &ori0, vector1< core::conformation::ResidueOP > &hits, Real const disth=0.5, Real const dotth=0.9848078) const =0
virtual void	place_c (KRSQuery const &q, Residue const &qrsd, vector1< core::conformation::ResidueOP > &hits) const =0
Public Member Functions inherited from utility::VirtualBase
	VirtualBase ()=default
	Default constructor. More...
virtual	~VirtualBase ()=default
	The virtual destructor is one of the main reasons for the VirtualBase class. More...
	VirtualBase (VirtualBase const &)=default
	VirtualBase (VirtualBase &&)=default
VirtualBase &	operator= (VirtualBase const &)=default
VirtualBase &	operator= (VirtualBase &&)=default

Protected Attributes
Pose const	pose_
vector1< Size > const	pos_
ImplicitFastClashCheck const	ifc_
std::map< std::string, vector1< Stub > >	stb_
std::map< std::string, vector1< ResidueOP > >	rsd_
core::chemical::ResidueTypeSetCAP	frs_

Constructor & Destructor Documentation

FunGroupTK()

FunGroupTK::FunGroupTK ( Pose  p_in, vector1< Size > &  pos  )

inline

References frs_, create_a3b_hbs::i, pos_, pose_, rsd_, and stb_.

Member Function Documentation

ifc()

ImplicitFastClashCheck const& FunGroupTK::ifc ( ) const

inline

References ifc_.

Referenced by run(), run_hd(), and run_hh().

place_c()

virtual void FunGroupTK::place_c ( KRSQuery const &  q, Residue const &  qrsd, vector1< core::conformation::ResidueOP > &  hits  ) const

pure virtual

Implemented in KinFunGroupTK, and BruteFunGroupTK.

Referenced by run().

place_n()

virtual void FunGroupTK::place_n ( Vec const &  cen0, Vec const &  axs0, Vec const &  ori0, vector1< core::conformation::ResidueOP > &  hits, Real const  disth = 0.5, Real const  dotth = 0.9848078  ) const

pure virtual

Implemented in KinFunGroupTK, and BruteFunGroupTK.

Member Data Documentation

frs_

core::chemical::ResidueTypeSetCAP FunGroupTK::frs_

protected

Referenced by FunGroupTK(), and KinFunGroupTK::place_c().

ifc_

ImplicitFastClashCheck const FunGroupTK::ifc_

protected

Referenced by ifc(), BruteFunGroupTK::place_c(), and KinFunGroupTK::place_c().

pos_

vector1<Size> const FunGroupTK::pos_

protected

Referenced by FunGroupTK(), BruteFunGroupTK::place_c(), and KinFunGroupTK::place_c().

pose_

Pose const FunGroupTK::pose_

protected

Referenced by FunGroupTK(), KinFunGroupTK::place_c(), and sidechain_cst_3.Residue::pose_num().

rsd_

std::map<std::string,vector1<ResidueOP> > FunGroupTK::rsd_

protected

Referenced by FunGroupTK(), BruteFunGroupTK::place_c(), and KinFunGroupTK::place_c().

stb_

std::map<std::string,vector1<Stub> > FunGroupTK::stb_

protected

Referenced by FunGroupTK(), BruteFunGroupTK::place_c(), and KinFunGroupTK::place_c().

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The documentation for this class was generated from the following file:

• src/apps/pilot/will/old/FunGroupTK.cc