PB_potential.cc File Reference

#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/util.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/util.hh>
#include <core/conformation/Residue.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/types.hh>
#include <core/scoring/electron_density/util.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/PoissonBoltzmannPotential.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/simple_moves/MutateResidue.hh>
#include <protocols/jobdist/standard_mains.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <utility/io/izstream.hh>
#include <utility/excn/Exceptions.hh>
#include <ostream>

Classes
class	PBPotentialMover

Namespaces
	PB_potential

Functions
int	main (int argc, char *argv[])

Variables
basic::options::FileOptionKey	PB_potential::potential_file ("PB_potential:potential_file")
basic::options::StringOptionKey	PB_potential::apbs_exe ("PB_potential:apbs_exe")
basic::options::IntegerVectorOptionKey	PB_potential::no_charge_on_chain ("PB_potential:no_charge_on_chain")
static basic::Tracer	TR ("pilot.yfsong.PB_potential")

Detailed Description

Author

Yifan Song

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References utility::options::OptionCollection::add(), PB_potential::apbs_exe, argv, test.T009_Exceptions::e, basic::init(), PBPotentialMover::initialize(), PB_potential::no_charge_on_chain, and basic::options::option.

Variable Documentation

TR

basic::Tracer TR("pilot.yfsong.PB_potential") ( "pilot.yfsong.PB_potential"  )

static