Directory dependency graph for jcorn:
Files | |
| file | hbond_connect.cc |
| file | hh_test.cc |
| file | hotspot_hash.cc |
| app to find potential hotspot residue placements on the surface of a protein target Method: make a disembodied residue, with option to make residue backbone invisible to the scorefxn centroid dock residue to the target, then full-atom dock and repack the residue only (must use -norepack1) write out all docked residues that contact the target with even a somewhat reasonable energy | |
| file | hshash_utils.cc |
| utilites for working with hotspot hash files Functions: 1) Make a subset of a hash based on a percentage or absolute score cutoff 2) Make a list of # of hotspots within 8A of a target residue. Useful for mapping hotspot density onto a target. See RLC's pymol scripts data2bfactor.py and color_b.py | |
| file | PREcst.py |
| file | predPRE.py |
| file | TwoChainInterface.cc |
| file | TwoChainTenANeighbors.cc |
