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| std::string | protocols::docking::comma_separated_partner_chains (std::string const &chains) |
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| void | protocols::docking::setup_foldtree (core::pose::Pose &pose, std::string const &partner_chainID, DockJumps &movable_jumps, bool rand_jump_res_partner2=false) |
| | Setup FoldTree for docking across an interface. The partners are described by a string for the partner chains (using pdb_chain identification) separated by "_". The foldtree is set up such that the jump points are at the center of masses of the two partners. More...
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| void | protocols::docking::setup_foldtree (core::pose::Pose const &pose, utility::vector1< bool > const &partner1, DockJumps &movable_jumps, core::kinematics::FoldTree &ft, bool rand_jump_res_partner2=false) |
| | Setup foldtree for docking across an interface. The partners are described by a vector of booleans of the same length as the number of residues in the pose. The FoldTree is set up such that the jump points are at the center of masses of the two partners. More...
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