RotamerDots.cc File Reference

RotamerDots classes files - ported from rosetta++. More...

#include <core/pack/interaction_graph/RotamerDots.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/Atom.hh>
#include <core/scoring/sasa/util.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <ObjexxFCL/ubyte.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/FArray1.hh>
#include <numeric/constants.hh>
#include <numeric/xyzVector.hh>
#include <utility/vector1.hh>
#include <utility/vector1.functions.hh>
#include <vector>
#include <iostream>
#include <ObjexxFCL/FArray2D.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::pack
	core::pack::interaction_graph

Functions
static basic::Tracer	TR_DS ("core.pack.interaction_graph.RotamerDots.DotSphere")
static basic::Tracer	TR_RD ("core.pack.interaction_graph.RotamerDots.RotamerDots")
static basic::Tracer	TR_RDC ("core.pack.interaction_graph.RotamerDots.RotamerDotsCache")
static basic::Tracer	TR_RDRD ("core.pack.interaction_graph.RotamerDots.RotamerDotsRadiusData")
bool	core::pack::interaction_graph::unpack_ubyte (ObjexxFCL::ubyte const &value, core::Size which_bit)
void	core::pack::interaction_graph::write_sphere_list_header (std::ostream &ostr, std::string const &color, bool off=false)
void	core::pack::interaction_graph::write_dot (std::ostream &ostr, core::Vector const &center, core::Real radius, Size const dot_index, std::string const &dot_name)
void	core::pack::interaction_graph::write_sphere_list_uv1 (std::ostream &ostr, std::string const &label, std::string const &color, core::Vector const &center, core::Real radius, utility::vector1< ObjexxFCL::ubyte > const &dot_masks)
void	core::pack::interaction_graph::write_sphere_list_farray (std::ostream &ostr, std::string const &label, std::string const &color, core::Vector const &center, core::Real radius, ObjexxFCL::FArray1< ObjexxFCL::ubyte > const &dot_masks)
std::ostream &	core::pack::interaction_graph::operator<< (std::ostream &os, DotSphere const &ds)
	invokes print on the input DotSphere object More...
std::ostream &	core::pack::interaction_graph::operator<< (std::ostream &os, RotamerDots const &rd)
	invokes print on the input RotamerDots object More...

Detailed Description

RotamerDots classes files - ported from rosetta++.

Author

Andrew Leaver-Fay

Ron Jacak

Function Documentation

TR_DS()

static basic::Tracer TR_DS ( "core.pack.interaction_graph.RotamerDots.DotSphere"  )

static

TR_RD()

static basic::Tracer TR_RD ( "core.pack.interaction_graph.RotamerDots.RotamerDots"  )

static

Referenced by core::pack::interaction_graph::RotamerDots::increment_from_cached().

TR_RDC()

static basic::Tracer TR_RDC ( "core.pack.interaction_graph.RotamerDots.RotamerDotsCache"  )

static

TR_RDRD()

static basic::Tracer TR_RDRD ( "core.pack.interaction_graph.RotamerDots.RotamerDotsRadiusData"  )

static

Referenced by core::pack::interaction_graph::RotamerDotsRadiusData::RotamerDotsRadiusData().