GenerateMainchainPotential.cc File Reference

A generator for mainchain potentials. Inputs are a noncanonical residue type with an already-generated sidechain potential; outputs are a potential file suitable for use by the RamaPrePro scoreterm. More...

#include <protocols/mainchain_potential/GenerateMainchainPotential.hh>
#include <protocols/mainchain_potential/GenerateMainchainPotentialOptions.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/variant_util.hh>
#include <core/scoring/Energies.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/mainchain_potential/MainchainScoreTable.hh>
#include <core/chemical/ResidueTypeFinder.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/id/TorsionID.hh>
#include <core/pack/rotamer_set/RotamerSets.hh>
#include <core/pack/rotamer_set/RotamerSet.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/PackerTask_.hh>
#include <core/pack/packer_neighbors.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <basic/Tracer.hh>
#include <utility/pointer/memory.hh>
#include <utility/exit.hh>
#include <utility/file/file_sys_util.hh>
#include <fstream>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::mainchain_potential

Functions
static basic::Tracer	TR ("protocols.mainchain_potential.GenerateMainchainPotential")

Detailed Description

A generator for mainchain potentials. Inputs are a noncanonical residue type with an already-generated sidechain potential; outputs are a potential file suitable for use by the RamaPrePro scoreterm.

Author

Vikram K. Mulligan (vmull.nosp@m.igan.nosp@m.@flat.nosp@m.iron.nosp@m.insti.nosp@m.tute.nosp@m..org)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.mainchain_potential.GenerateMainchainPotential"  )

static