ParsedProtocol.cc File Reference

A mover that applies a protocol parsed from a ROSETTASCRIPTS script. More...

#include <protocols/rosetta_scripts/ParsedProtocol.hh>
#include <protocols/rosetta_scripts/ParsedProtocolCreator.hh>
#include <basic/datacache/DataMapObj.hh>
#include <basic/datacache/DataMap.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <core/simple_metrics/SimpleMetric.hh>
#include <core/simple_metrics/util.hh>
#include <protocols/filters/Filter.hh>
#include <protocols/moves/ResId.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/MoverStatus.hh>
#include <protocols/moves/MoverFactory.hh>
#include <protocols/filters/FilterFactory.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/rosetta_scripts/MultiplePoseMover.hh>
#include <basic/Tracer.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <basic/options/keys/parser.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/Job.fwd.hh>
#include <protocols/jd2/util.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/string_util.hh>
#include <numeric/random/random.hh>
#include <numeric/random/random_permutation.hh>
#include <string>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <basic/citation_manager/CitationCollectionBase.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::rosetta_scripts

Typedefs
using	protocols::rosetta_scripts::Real = core::Real
using	protocols::rosetta_scripts::Pose = core::pose::Pose

Functions
static basic::Tracer	protocols::rosetta_scripts::TR ("protocols.rosetta_scripts.ParsedProtocol")
static basic::Tracer	protocols::rosetta_scripts::TR_call_order ("protocols.rosetta_scripts.ParsedProtocol_call_order")
static basic::Tracer	protocols::rosetta_scripts::TR_report ("protocols.rosetta_scripts.ParsedProtocol.REPORT")
std::pair< moves::MoverOP, std::string >	protocols::rosetta_scripts::parse_mover_subtag (utility::tag::TagCOP const tag_ptr, basic::datacache::DataMap &data)
std::string	protocols::rosetta_scripts::complex_type_name_for_parsed_protocol_subelement (std::string const &foo)

Detailed Description

A mover that applies a protocol parsed from a ROSETTASCRIPTS script.

Author

Sarel Fleishman (sarel.nosp@m.f@u..nosp@m.washi.nosp@m.ngto.nosp@m.n.edu)

Luki Goldschmidt (lugo@.nosp@m.uw.e.nosp@m.du)

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu) – Modified this to facilitate use of ParsedProtocols to combine movers and filters in code outside of a RosettaScripts context.