LigandDesign.cc File Reference

@Gordon Lemmon More...

#include <protocols/ligand_docking/LigandDesign.hh>
#include <protocols/ligand_docking/LigandDesignCreator.hh>
#include <core/pose/util.hh>
#include <protocols/moves/Mover.hh>
#include <basic/options/option.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <utility/assert.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/ResidueTypeFinder.hh>
#include <core/chemical/ChemicalManager.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector1.hh>
#include <numeric/random/random.hh>
#include <core/conformation/Conformation.hh>
#include <core/pose/Pose.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <basic/options/keys/OptionKeys.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::ligand_docking

Functions
static basic::Tracer	protocols::ligand_docking::ligand_design_tracer ("protocols.ligand_docking.LigandDesign", basic::t_debug)
bool	protocols::ligand_docking::grow (core::pose::Pose pose, core::Size start, core::Size end)
bool	protocols::ligand_docking::has_incomplete_connections (core::pose::Pose pose, core::Size start, core::Size const end)
bool	protocols::ligand_docking::passes_filters (core::pose::Pose const &pose, core::Size start, core::Size const end)
core::Size	protocols::ligand_docking::random_connection (core::conformation::ResidueCOP residue)
utility::vector1< core::Size >	protocols::ligand_docking::get_incomplete_connections (core::conformation::ResidueCOP residue)
utility::vector1< core::Size >	protocols::ligand_docking::find_unconnected_residues (core::pose::Pose const &pose, core::Size start, core::Size const end)

Detailed Description

@Gordon Lemmon