FindConsensusSequence.cc File Reference

Takes in multiple poses from the VectorPoseJobDistributor and finds the consensus sequence that optimizes energy of all input poses. Used in conjuction with MSDMover at the end of a protocol to make sure that you end up with one multistate solution. Only accessible through recon application. More...

#include <protocols/recon_design/FindConsensusSequence.hh>
#include <protocols/recon_design/FindConsensusSequenceCreator.hh>
#include <protocols/moves/VectorPoseMover.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <basic/Tracer.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <utility/tag/Tag.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/scoring/xml_util.hh>
#include <core/pack/task/xml_util.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/simple_moves/MutateResidue.hh>
#include <utility/mpi_util.hh>
#include <utility/string_util.hh>
#include <protocols/recon_design/recon_util.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <core/pack/task/TaskFactory.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::recon_design

Functions
static basic::Tracer	protocols::recon_design::TR ("protocols.recon_design.FindConsensusSequence")

Detailed Description

Takes in multiple poses from the VectorPoseJobDistributor and finds the consensus sequence that optimizes energy of all input poses. Used in conjuction with MSDMover at the end of a protocol to make sure that you end up with one multistate solution. Only accessible through recon application.

Author

Alex Sevy (alex..nosp@m.sevy.nosp@m.@gmai.nosp@m.l.co.nosp@m.m)