AntibodyModelerProtocol.cc File Reference

Build a homology model of an antibody. More...

#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/prof.hh>
#include <basic/Tracer.hh>
#include <core/chemical/ChemicalManager.fwd.hh>
#include <core/import_pose/import_pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreType.hh>
#include <core/chemical/ResidueType.hh>
#include <ObjexxFCL/format.hh>
#include <protocols/antibody/AntibodyInfo.hh>
#include <protocols/antibody/AntibodyModelerProtocol.hh>
#include <protocols/antibody/AntibodyNumberingConverterMover.hh>
#include <protocols/antibody/CDRsMinPackMin.hh>
#include <protocols/antibody/RefineBetaBarrel.hh>
#include <protocols/antibody/metrics.hh>
#include <protocols/antibody/util.hh>
#include <protocols/antibody/snugdock/SnugDock.hh>
#include <protocols/antibody/design/util.hh>
#include <protocols/analysis/InterfaceAnalyzerMover.hh>
#include <protocols/jd2/util.hh>
#include <protocols/loops/loops_main.hh>
#include <protocols/constraint_movers/ConstraintSetMover.hh>
#include <protocols/simple_moves/ReturnSidechainMover.hh>
#include <protocols/simple_moves/SwitchResidueTypeSetMover.hh>
#include <protocols/loop_modeling/LoopProtocol.hh>
#include <protocols/loop_modeler/LoopModeler.hh>
#include <core/conformation/Residue.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::antibody

Functions
static basic::Tracer	TR ("protocols.antibody.AntibodyModelerProtocol")
std::ostream &	protocols::antibody::operator<< (std::ostream &out, const AntibodyModelerProtocol &ab_m)

Detailed Description

Build a homology model of an antibody.

Author

Jianqing Xu ( xubes.nosp@m.t@gm.nosp@m.ail.c.nosp@m.om )

Function Documentation

TR()

static basic::Tracer TR ( "protocols.antibody.AntibodyModelerProtocol"  )

static