minimize_util.cc File Reference

#include <protocols/magnesium/minimize_util.hh>
#include <protocols/magnesium/util.hh>
#include <protocols/magnesium/MgMinimizer.hh>
#include <core/chemical/rna/util.hh>
#include <core/chemical/ResidueType.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/import_pose/import_pose.hh>
#include <basic/Tracer.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::magnesium

Functions
static basic::Tracer	TR ("protocols.magnesium.minimize_util")
void	protocols::magnesium::minimize_magnesium_and_hydration_shell (pose::Pose &pose, utility::vector1< core::Size > const &mg_res, core::scoring::ScoreFunctionCOP minimize_scorefxn, core::Distance const mg_coord_cst_dist)
void	protocols::magnesium::minimize_magnesium_and_hydration_shell (pose::Pose &pose, utility::vector1< pose::PoseOP > &pose_list, utility::vector1< core::Size > const &mg_res, core::scoring::ScoreFunctionCOP minimize_scorefxn, core::Distance const mg_coord_cst_dist)
void	protocols::magnesium::update_mg_hoh_fold_tree (pose::Pose &pose)
core::id::AtomID	protocols::magnesium::get_closest_non_hoh_contact (pose::Pose const &pose, core::Size const i, std::string const &exclude_rsd)

Detailed Description

Author

Rhiju Das, rhiju.nosp@m.@sta.nosp@m.nford.nosp@m..edu

Function Documentation

TR()

static basic::Tracer TR ( "protocols.magnesium.minimize_util"  )

static