Motif.cc File Reference

Implementation of interaction motifs. More...

#include <protocols/motifs/Motif.hh>
#include <protocols/dna/util.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/conformation/Atom.hh>
#include <core/conformation/Residue.hh>
#include <utility/graph/Graph.fwd.hh>
#include <core/kinematics/Jump.hh>
#include <core/pack/packer_neighbors.hh>
#include <core/pack/rotamer_set/RotamerSet.hh>
#include <core/pack/rotamer_set/RotamerSetFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreType.hh>
#include <basic/Tracer.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <utility/string_util.hh>
#include <utility/tools/make_vector1.hh>
#include <utility/tools/make_map.hh>
#include <sstream>
#include <utility/vector1.hh>
#include <core/pack/task/ResidueLevelTask.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::motifs

Functions
static basic::Tracer	protocols::motifs::mt ("protocols.motifs.Motif", basic::t_info)
std::ostream &	protocols::motifs::operator<< (std::ostream &os, Motif const &motif)

Detailed Description

Implementation of interaction motifs.

Author

havranek, sthyme (sthym.nosp@m.e@gm.nosp@m.ail.c.nosp@m.om)