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| protocols::fldsgn::topology::StrandPairingSet | protocols::fldsgn::topology::calc_strand_pairing_set (core::pose::Pose const &pose, protocols::fldsgn::topology::SS_Info2_COP const ssinfo, core::Size minimum_pair_length) |
| | convert StrandParingSet of dssp to fldsgn::topology::StrandPairingSet More...
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| core::Real | protocols::fldsgn::topology::calc_delta_sasa (core::pose::Pose const &pose, utility::vector1< protocols::forge::build::Interval > intervals, Real const pore_radius) |
| | calc delta sasa, when a molecule is splited to 2parts. More...
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| core::Size | protocols::fldsgn::topology::check_kink_helix (core::pose::Pose const &pose, core::Size const begin, core::Size const end) |
| | check kink of helix, return number of loosen hydrogen More...
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| utility::vector1< core::scoring::hbonds::HBond > | protocols::fldsgn::topology::check_internal_hbonds (core::pose::Pose const &pose, core::Size const begin, core::Size const end) |
| | check kink of helix, return number of loosen hydrogen More...
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| core::Real | protocols::fldsgn::topology::calc_strand_helix_angle (core::pose::Pose const &pose, protocols::fldsgn::topology::SS_Info2_COP const ssinfo, core::Size const strand_id1, core::Size const strand_id2, core::Size const helix_id, std::string const &geom_type) |
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