Directory dependency graph for rotamer_recovery:
Files | |
| file | RotamerRecovery.cc |
| file | RotamerRecovery.fwd.hh |
| Measure how well rosetta is a recovering the conformation of an experimentally validated structure. | |
| file | RotamerRecovery.hh |
| file | RotamerRecoveryCreator.cc |
| Creator classes for components of the RotamerRecovery framework. | |
| file | RotamerRecoveryCreator.fwd.hh |
| file | RotamerRecoveryCreator.hh |
| file | RotamerRecoveryFactory.cc |
| Factory for creating RotamerRecoverys objects. | |
| file | RotamerRecoveryFactory.fwd.hh |
| report atom-atom pair geometry and scores to rotamer_recovery Statistics Scientific Benchmark | |
| file | RotamerRecoveryFactory.hh |
| Factory for creating RotamerRecovery objects. | |
| file | RotamerRecoveryMover.cc |
| A wrapper that measures how similar the rotamers are between before and after running the child mover. | |
| file | RotamerRecoveryMover.fwd.hh |
| Measure how well rosetta is a recovering the conformation of an experimentally validated structure. | |
| file | RotamerRecoveryMover.hh |
| A wrapper that measures how similar the rotamers are between before and after running the child mover. | |
| file | RotamerRecoveryMoverCreator.hh |
| This class will create instances of Mover ConstraintSetMover for the MoverFactory. | |
| file | RRComparer.cc |
| file | RRComparer.fwd.hh |
| Measure how well rosetta is a recovering the conformation of an experimentally validated structure. | |
| file | RRComparer.hh |
| file | RRComparerAutomorphicRMSD.cc |
| file | RRComparerAutomorphicRMSD.fwd.hh |
| Measure how well rosetta is a recovering the conformation of an experimentally validated structure by measuing the minimum root mean squared deviation of sidechain atoms for all chemical atomorphic forms. | |
| file | RRComparerAutomorphicRMSD.hh |
| file | RRComparerElecDensDiff.cc |
| file | RRComparerElecDensDiff.fwd.hh |
| Measure rotamer recovery by change in sidechain electron density correlation. | |
| file | RRComparerElecDensDiff.hh |
| file | RRProtocol.cc |
| file | RRProtocol.fwd.hh |
| Manage how the rotamer recovery test should be preformed. | |
| file | RRProtocol.hh |
| file | RRProtocolMinPack.cc |
| file | RRProtocolMinPack.fwd.hh |
| Preform the rotamer recovery test by minimizing each residue in a fixed context. | |
| file | RRProtocolMinPack.hh |
| file | RRProtocolMover.cc |
| Preform the rotamer recovery after applying mover. | |
| file | RRProtocolMover.fwd.hh |
| Preform the rotamer recovery after applying mover. | |
| file | RRProtocolMover.hh |
| Preform the rotamer recovery after applying mover. | |
| file | RRProtocolPackRotamers.cc |
| file | RRProtocolPackRotamers.fwd.hh |
| Preform the rotamer recovery test using the pack_rotamers discrete optimization algorithm. | |
| file | RRProtocolPackRotamers.hh |
| file | RRProtocolReferenceStructure.cc |
| Preform the rotamer recovery against a reference structure. | |
| file | RRProtocolReferenceStructure.fwd.hh |
| Preform the rotamer recovery after applying mover. | |
| file | RRProtocolReferenceStructure.hh |
| Preform the rotamer recovery against a reference structure. | |
| file | RRProtocolRelax.cc |
| Perform the rotamer recovery test using the FastRelax protocol. | |
| file | RRProtocolRelax.fwd.hh |
| Perform the rotamer recovery test using the FastRelax protocol. | |
| file | RRProtocolRelax.hh |
| file | RRProtocolRotamerTrials.cc |
| file | RRProtocolRotamerTrials.fwd.hh |
| Preform the rotamer recovery test by determining the lowest energy (discrete) rotamer for each residue in a fixed context. | |
| file | RRProtocolRotamerTrials.hh |
| file | RRProtocolRTMin.cc |
| file | RRProtocolRTMin.fwd.hh |
| Preform the rotamer recovery test by minimizing each residue in a fixed context. | |
| file | RRProtocolRTMin.hh |
| file | RRReporter.cc |
| file | RRReporter.fwd.hh |
| file | RRReporter.hh |
| file | RRReporterHuman.cc |
| file | RRReporterHuman.fwd.hh |
| Report how well rosetta is a recovering the conformation of an experimentally validated structure in a human readable format. | |
| file | RRReporterHuman.hh |
| file | RRReporterSQLite.cc |
| file | RRReporterSQLite.fwd.hh |
| Report Rotamer Recovery to an SQLite database. | |
| file | RRReporterSQLite.hh |
