Directory dependency graph for helical_bundle:
Directories | |
| directory | parameters |
Files | |
| file | BackboneGridSampler.cc |
| This mover samples conformations of a repeating chain of a residue type by grid-sampling mainchain torsion values and setting all residues in a range to have the same mainchain torsion values. | |
| file | BackboneGridSampler.fwd.hh |
| Defines owning pointers for BackboneGridSampler mover class. | |
| file | BackboneGridSampler.hh |
| Headers for BackboneGridSampler.cc. Samples conformations of a repeating chain of a residue type by grid-sampling mainchain torsion values and setting all residues in a range to have the same mainchain torsion values. | |
| file | BackboneGridSamplerCreator.hh |
| This class will create instances of Mover BackboneGridSampler for the MoverFactory. | |
| file | BackboneGridSamplerHelper.cc |
| A class that stores the various mainchain torsion values that will be sampled by the BackboneGridSampler mover. | |
| file | BackboneGridSamplerHelper.fwd.hh |
| Owning pointers and whatnot for BackboneGridSamplerHelper class. | |
| file | BackboneGridSamplerHelper.hh |
| A class that stores the various mainchain torsion values that will be sampled by the BackboneGridSampler mover. | |
| file | BundleGridSampler.cc |
| This mover samples conformations of a helical bundle by performing a grid search in Crick parameter space. | |
| file | BundleGridSampler.fwd.hh |
| Defines owning pointers for BundleGridSampler mover class. | |
| file | BundleGridSampler.hh |
| Headers for BundleGridSampler.cc. Samples conformations of a helical bundle by performing a grid search in Crick parameter space. | |
| file | BundleGridSamplerCreator.hh |
| This class will create instances of Mover BundleGridSampler for the MoverFactory. | |
| file | BundleGridSamplerHelper.cc |
| A class that stores the various parameter perturbations that will be sampled by the BundleGridSampler mover. | |
| file | BundleGridSamplerHelper.fwd.hh |
| Owning pointers and whatnot for BundleGridSamplerHelper class. | |
| file | BundleGridSamplerHelper.hh |
| Prototypes and method declarations for the BundleGridSamplerHelper class. | |
| file | BundleParametrizationCalculator.cc |
| file | BundleParametrizationCalculator.fwd.hh |
| Forward declarations for the BundleParametrizationCalculator class. | |
| file | BundleParametrizationCalculator.hh |
| Prototypes and method declarations for the BundleParametrizationCalculator class. | |
| file | BundleReporterFilter.cc |
| A filter that is mainly intended for reporting helical bundle parameters and an associated energy. | |
| file | BundleReporterFilter.fwd.hh |
| file | BundleReporterFilter.hh |
| Header files for a filter that is mainly intended for reporting helical bundle parameters and an associated energy. | |
| file | BundleReporterFilterCreator.hh |
| Creators for the BundleReporterFilterCreator. | |
| file | FitSimpleHelix.cc |
| Determines the Crick parameters describing a straight helix, given an input pose. | |
| file | FitSimpleHelix.fwd.hh |
| Defines owning pointers for FitSimpleHelix mover class. | |
| file | FitSimpleHelix.hh |
| Headers for FitSimpleHelix mover class. | |
| file | FitSimpleHelixCreator.hh |
| This class will create instances of Mover FitSimpleHelix for the MoverFactory. | |
| file | FitSimpleHelixMultiFunc.cc |
| Multifunction class implementation for fitting a simple (straight) helix to the Crick parameters. | |
| file | FitSimpleHelixMultiFunc.hh |
| Multifunction class implementation for fitting a simple (straight) helix to the Crick parameters. | |
| file | MakeBundle.cc |
| Builds a helical bundle using the Crick parameters. | |
| file | MakeBundle.fwd.hh |
| Defines owning pointers for MakeBundle mover class. | |
| file | MakeBundle.hh |
| Headers for MakeBundle.cc. Builds a helical bundle using the Crick parameters. | |
| file | MakeBundleCreator.hh |
| This class will create instances of Mover MakeBundle for the MoverFactory. | |
| file | MakeBundleHelix.cc |
| Builds a single helix as part of a helical bundle. | |
| file | MakeBundleHelix.fwd.hh |
| Defines owning pointers for MakeBundleHelix mover class. | |
| file | MakeBundleHelix.hh |
| Headers for MakeBundleHelix.cc. Builds a single helix as part of a helical bundle. | |
| file | MakeBundleHelixCreator.hh |
| This class will create instances of Mover MakeBundleHelix for the MoverFactory. | |
| file | PerturbBundle.cc |
| Perturbs a helical bundle by altering the Crick parameters. | |
| file | PerturbBundle.fwd.hh |
| Defines owning pointers for PerturbBundle mover class. | |
| file | PerturbBundle.hh |
| Headers for PerturbBundle.cc. Perturbs a helical bundle by altering the Crick parameters. | |
| file | PerturbBundleCreator.hh |
| This class will create instances of Mover PerturbBundle for the MoverFactory. | |
| file | PerturbBundleHelix.cc |
| Reads the Crick parameters for a piece of a pose from the input pose and sets the mainchain torsions accordingly. The parameters are presumed to have been perturbed by another mover. This mover is intended to be called by the PerturbBundle mover, which handles the perturbation of the Crick parameters. | |
| file | PerturbBundleHelix.fwd.hh |
| Defines owning pointers for PerturbBundleHelix mover class. | |
| file | PerturbBundleHelix.hh |
| Headers for PerturbBundleHelix.cc. Reads the Crick parameters for a piece of a pose from the input pose and sets the mainchain torsions accordingly. The parameters are presumed to have been perturbed by another mover. This mover is intended to be called by the PerturbBundle mover, which handles the perturbation of the Crick parameters. | |
| file | PerturbBundleHelixCreator.hh |
| This class will create instances of Mover PerturbBundleHelix for the MoverFactory. | |
| file | util.cc |
| Utility functions for helical bundle construction. | |
| file | util.hh |
