|
| file | branch_energy_util.cc |
| |
| file | branch_energy_util.hh |
| |
| file | CartBondedParameters.hh |
| |
| file | chainbreak_util.cc |
| | Utility functions for scoring chainbreaks.
|
| |
| file | chainbreak_util.hh |
| | Utility functions for scoring chainbreaks.
|
| |
| file | ContextDependentLRTwoBodyEnergy.cc |
| | Context-Dependent, Long-Range, Two-Body Energy class implementation.
|
| |
| file | ContextDependentLRTwoBodyEnergy.fwd.hh |
| | Context-Dependent, Long-Range, Two-Body Energy Method class forward declaration.
|
| |
| file | ContextDependentLRTwoBodyEnergy.hh |
| |
| file | ContextDependentOneBodyEnergy.cc |
| |
| file | ContextDependentOneBodyEnergy.fwd.hh |
| |
| file | ContextDependentOneBodyEnergy.hh |
| |
| file | ContextDependentTwoBodyEnergy.cc |
| | Score function class.
|
| |
| file | ContextDependentTwoBodyEnergy.fwd.hh |
| | Forward declaration for the Context-Dependent (ShortRange) Two-Body EnergyMethod base class.
|
| |
| file | ContextDependentTwoBodyEnergy.hh |
| |
| file | ContextIndependentLRTwoBodyEnergy.cc |
| | Context-Independent, Long-Range, Two-Body Energy class implementation.
|
| |
| file | ContextIndependentLRTwoBodyEnergy.fwd.hh |
| | Context-Independent, Long-Range, Two-Body Energy Method class forward declaration.
|
| |
| file | ContextIndependentLRTwoBodyEnergy.hh |
| | Context-Dependent, Long-Range, Two-Body Energy class declaration.
|
| |
| file | ContextIndependentOneBodyEnergy.cc |
| |
| file | ContextIndependentOneBodyEnergy.fwd.hh |
| |
| file | ContextIndependentOneBodyEnergy.hh |
| |
| file | ContextIndependentTwoBodyEnergy.cc |
| |
| file | ContextIndependentTwoBodyEnergy.fwd.hh |
| |
| file | ContextIndependentTwoBodyEnergy.hh |
| | Short ranged, context-independent, two-body energy class declaration.
|
| |
| file | EnergyMethod.cc |
| |
| file | EnergyMethod.fwd.hh |
| | Energy Method class forward declaration and EnergyMethodType enum definition.
|
| |
| file | EnergyMethod.hh |
| |
| file | EnergyMethodCreator.fwd.hh |
| | Base class for EnergyMethod factory-registration and creation classes.
|
| |
| file | EnergyMethodCreator.hh |
| | Declaration of the base class for EnergyMethod factory registration and creation.
|
| |
| file | EnergyMethodOptions.cc |
| |
| file | EnergyMethodOptions.fwd.hh |
| |
| file | EnergyMethodOptions.hh |
| |
| file | EnergyMethodRegistrator.hh |
| | Declaration of the base class for EnergyMethod factory registration and creation.
|
| |
| file | FreeDOF_Options.cc |
| |
| file | FreeDOF_Options.fwd.hh |
| |
| file | FreeDOF_Options.hh |
| |
| file | LongRangeTwoBodyEnergy.cc |
| | Long-Range, Two-Body Energy class implementation.
|
| |
| file | LongRangeTwoBodyEnergy.fwd.hh |
| | Long range two body energy method class forward declaration.
|
| |
| file | LongRangeTwoBodyEnergy.hh |
| | Long range two body energy method class declaration.
|
| |
| file | Methods.hh |
| | Energy Method enumeration.
|
| |
| file | MMBondAngleEnergy.cc |
| |
| file | MMBondAngleEnergy.fwd.hh |
| | molecular mechanics bond angle energy forward declaration
|
| |
| file | MMBondAngleEnergy.hh |
| | molecular mechanics bond angle energy
|
| |
| file | MMBondAngleEnergyCreator.hh |
| | Declaration for the class that connects MMBondAngleEnergy with the ScoringManager.
|
| |
| file | MMBondLengthEnergy.cc |
| |
| file | MMBondLengthEnergy.fwd.hh |
| | Molecular mechanics bond length score class.
|
| |
| file | MMBondLengthEnergy.hh |
| | Molecular mechanics bond length score class.
|
| |
| file | MMBondLengthEnergyCreator.hh |
| | Molecular mechanics bond length score class.
|
| |
| file | MMLJEnergyInter.cc |
| |
| file | MMLJEnergyInter.fwd.hh |
| | molecular mechanics lj energy forward declaration
|
| |
| file | MMLJEnergyInter.hh |
| | molecular mechanics lj energy
|
| |
| file | MMLJEnergyInterCreator.hh |
| | Declaration for the class that connects MMLJEnergyInter with the ScoringManager.
|
| |
| file | MMLJEnergyIntra.cc |
| |
| file | MMLJEnergyIntra.fwd.hh |
| | molecular mechanics lj energy forward declaration
|
| |
| file | MMLJEnergyIntra.hh |
| | molecular mechanics lj energy
|
| |
| file | MMLJEnergyIntraCreator.hh |
| | Declaration for the class that connects MMLJEnergyIntra with the ScoringManager.
|
| |
| file | MMTorsionEnergy.cc |
| |
| file | MMTorsionEnergy.fwd.hh |
| | molecular mechanics torsion energy forward declaration
|
| |
| file | MMTorsionEnergy.hh |
| | molecular mechanics torsion energy
|
| |
| file | MMTorsionEnergyCreator.hh |
| | Declaration for the class that connects MMTorsionEnergy with the ScoringManager.
|
| |
| file | OneBodyEnergy.cc |
| |
| file | OneBodyEnergy.fwd.hh |
| |
| file | OneBodyEnergy.hh |
| |
| file | PyEnergyMethodRegisterer.hh |
| | EnergyMethod factory registration and creation in PyRosetta.
|
| |
| file | ShortRangeTwoBodyEnergy.cc |
| | Short-Range, Two-Body Energy Method base class implementation.
|
| |
| file | ShortRangeTwoBodyEnergy.fwd.hh |
| | Short Range Two Body Energy Method base class forward declaration.
|
| |
| file | ShortRangeTwoBodyEnergy.hh |
| | Short Range Two Body Energy Method base class declaration.
|
| |
| file | TwoBodyEnergy.cc |
| | Two Body Energy Method base class implementation.
|
| |
| file | TwoBodyEnergy.fwd.hh |
| | Two Body Energy Method base class forward declaration.
|
| |
| file | TwoBodyEnergy.hh |
| | Two Body Energy Method base class declaration.
|
| |
| file | util.cc |
| | utility methods for scoring.
|
| |
| file | util.hh |
| | Utility functions for the distance-dependent dielectric potential.
|
| |
| file | WholeStructureEnergy.cc |
| | Implementation of the EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.
|
| |
| file | WholeStructureEnergy.fwd.hh |
| | EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.
|
| |
| file | WholeStructureEnergy.hh |
| | EnergyMethod that applies to a whole structure and not on a residue-by-residue basis.
|
| |
